Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1bP97952 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1bP97952 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.1□□□□□ -0.47
Scn1bP97952 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1bP97952 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1bP97952 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.1□□□□□ -0.47
Scn1bP97952 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.1□□□□□ -0.47
Scn1bP97952 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1bP97952 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1bP97952 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.1□□□□□ -0.47
Scn1bP97952 Gm6973-201ENSMUST00000117080 721 ntBASIC12.1□□□□□ -0.47
Scn1bP97952 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Scn1bP97952 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.1□□□□□ -0.47
Scn1bP97952 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.1□□□□□ -0.47
Scn1bP97952 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1bP97952 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.1□□□□□ -0.47
Scn1bP97952 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.1□□□□□ -0.47
Scn1bP97952 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1bP97952 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1bP97952 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1bP97952 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1bP97952 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1bP97952 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1bP97952 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Scn1bP97952 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1bP97952 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.1□□□□□ -0.47
Scn1bP97952 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1bP97952 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1bP97952 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1bP97952 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1bP97952 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1bP97952 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1bP97952 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1bP97952 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1bP97952 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1bP97952 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.09□□□□□ -0.47
Scn1bP97952 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1bP97952 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Scn1bP97952 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1bP97952 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Scn1bP97952 Gm15467-201ENSMUST00000120582 445 ntBASIC12.09□□□□□ -0.47
Scn1bP97952 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.09□□□□□ -0.47
Scn1bP97952 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1bP97952 Gm44771-201ENSMUST00000206975 626 ntBASIC12.09□□□□□ -0.47
Scn1bP97952 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.09□□□□□ -0.47
Scn1bP97952 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.09□□□□□ -0.47
Scn1bP97952 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.09□□□□□ -0.47
Scn1bP97952 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.09□□□□□ -0.47
Scn1bP97952 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1bP97952 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Scn1bP97952 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1bP97952 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1bP97952 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1bP97952 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1bP97952 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1bP97952 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.09□□□□□ -0.47
Scn1bP97952 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.09□□□□□ -0.47
Scn1bP97952 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1bP97952 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.09□□□□□ -0.47
Scn1bP97952 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.09□□□□□ -0.47
Scn1bP97952 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Scn1bP97952 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1bP97952 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.09□□□□□ -0.47
Scn1bP97952 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.47
Scn1bP97952 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.47
Scn1bP97952 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Scn1bP97952 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Scn1bP97952 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Scn1bP97952 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.08□□□□□ -0.47
Scn1bP97952 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1bP97952 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Scn1bP97952 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1bP97952 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Scn1bP97952 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.08□□□□□ -0.48
Scn1bP97952 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1bP97952 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Scn1bP97952 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1bP97952 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1bP97952 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1bP97952 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.08□□□□□ -0.48
Scn1bP97952 Gm11025-201ENSMUST00000140773 466 ntBASIC12.08□□□□□ -0.48
Scn1bP97952 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Scn1bP97952 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Scn1bP97952 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.08□□□□□ -0.48
Scn1bP97952 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1bP97952 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1bP97952 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.08□□□□□ -0.48
Scn1bP97952 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1bP97952 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1bP97952 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.08□□□□□ -0.48
Scn1bP97952 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1bP97952 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1bP97952 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Scn1bP97952 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1bP97952 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.08□□□□□ -0.48
Scn1bP97952 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Scn1bP97952 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.08□□□□□ -0.48
Scn1bP97952 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1bP97952 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1bP97952 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms