Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.52■□□□□ 0.24
Smarcc1P97496 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcc1P97496 Gm14263-201ENSMUST00000117955 746 ntBASIC16.52■□□□□ 0.24
Smarcc1P97496 Gm12217-201ENSMUST00000118858 696 ntBASIC16.52■□□□□ 0.24
Smarcc1P97496 Gm12566-201ENSMUST00000121479 359 ntBASIC16.52■□□□□ 0.24
Smarcc1P97496 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcc1P97496 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Smarcc1P97496 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC16.52■□□□□ 0.24
Smarcc1P97496 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcc1P97496 AA914427-201ENSMUST00000193194 1166 ntBASIC16.52■□□□□ 0.24
Smarcc1P97496 Gm42997-202ENSMUST00000200321 985 ntBASIC16.52■□□□□ 0.24
Smarcc1P97496 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
Smarcc1P97496 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC16.52■□□□□ 0.24
Smarcc1P97496 Gm5950-201ENSMUST00000213337 772 ntBASIC16.52■□□□□ 0.24
Smarcc1P97496 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcc1P97496 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcc1P97496 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcc1P97496 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcc1P97496 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcc1P97496 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smarcc1P97496 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Smarcc1P97496 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smarcc1P97496 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smarcc1P97496 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smarcc1P97496 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc1P97496 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
Smarcc1P97496 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc1P97496 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Smarcc1P97496 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Smarcc1P97496 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc1P97496 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc1P97496 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc1P97496 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc1P97496 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.51■□□□□ 0.23
Smarcc1P97496 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc1P97496 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC16.51■□□□□ 0.23
Smarcc1P97496 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC16.51■□□□□ 0.23
Smarcc1P97496 Mir6927-201ENSMUST00000184494 71 ntBASIC16.51■□□□□ 0.23
Smarcc1P97496 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc1P97496 AC135669.1-202ENSMUST00000216742 540 ntBASIC16.51■□□□□ 0.23
Smarcc1P97496 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc1P97496 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc1P97496 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Smarcc1P97496 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc1P97496 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc1P97496 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.51■□□□□ 0.23
Smarcc1P97496 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc1P97496 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC16.51■□□□□ 0.23
Smarcc1P97496 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcc1P97496 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Smarcc1P97496 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc1P97496 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc1P97496 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Smarcc1P97496 Gm4366-201ENSMUST00000201488 1342 ntBASIC16.5■□□□□ 0.23
Smarcc1P97496 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Smarcc1P97496 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Smarcc1P97496 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Smarcc1P97496 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc1P97496 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Smarcc1P97496 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc1P97496 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Smarcc1P97496 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc1P97496 Snord83b-201ENSMUST00000104546 94 ntBASIC16.5■□□□□ 0.23
Smarcc1P97496 Gm7857-201ENSMUST00000117957 358 ntBASIC16.5■□□□□ 0.23
Smarcc1P97496 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.5■□□□□ 0.23
Smarcc1P97496 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC16.5■□□□□ 0.23
Smarcc1P97496 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc1P97496 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC16.5■□□□□ 0.23
Smarcc1P97496 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc1P97496 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc1P97496 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc1P97496 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc1P97496 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc1P97496 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Smarcc1P97496 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc1P97496 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Smarcc1P97496 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC16.5■□□□□ 0.23
Smarcc1P97496 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc1P97496 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc1P97496 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc1P97496 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc1P97496 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc1P97496 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc1P97496 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Smarcc1P97496 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc1P97496 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc1P97496 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc1P97496 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc1P97496 Gm11930-201ENSMUST00000117788 190 ntBASIC16.49■□□□□ 0.23
Smarcc1P97496 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc1P97496 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc1P97496 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc1P97496 Gm5904-201ENSMUST00000210286 865 ntBASIC16.49■□□□□ 0.23
Smarcc1P97496 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc1P97496 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC16.49■□□□□ 0.23
Smarcc1P97496 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc1P97496 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Smarcc1P97496 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Smarcc1P97496 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc1P97496 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms