Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps45P97390 Gm27572-201ENSMUST00000183702 255 ntBASIC13.72□□□□□ -0.21
Vps45P97390 Gm29127-201ENSMUST00000188304 517 ntBASIC13.72□□□□□ -0.21
Vps45P97390 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Vps45P97390 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Vps45P97390 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Vps45P97390 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.72□□□□□ -0.21
Vps45P97390 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.72□□□□□ -0.21
Vps45P97390 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.72□□□□□ -0.21
Vps45P97390 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps45P97390 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps45P97390 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.72□□□□□ -0.21
Vps45P97390 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.72□□□□□ -0.21
Vps45P97390 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps45P97390 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps45P97390 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps45P97390 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps45P97390 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps45P97390 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.71□□□□□ -0.21
Vps45P97390 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps45P97390 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps45P97390 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps45P97390 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vps45P97390 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps45P97390 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps45P97390 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.71□□□□□ -0.21
Vps45P97390 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Vps45P97390 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps45P97390 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps45P97390 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Vps45P97390 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps45P97390 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps45P97390 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps45P97390 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.71□□□□□ -0.21
Vps45P97390 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.71□□□□□ -0.21
Vps45P97390 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Vps45P97390 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Vps45P97390 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps45P97390 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vps45P97390 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.71□□□□□ -0.21
Vps45P97390 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.71□□□□□ -0.21
Vps45P97390 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps45P97390 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vps45P97390 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.71□□□□□ -0.21
Vps45P97390 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.71□□□□□ -0.21
Vps45P97390 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps45P97390 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Vps45P97390 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.71□□□□□ -0.22
Vps45P97390 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps45P97390 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps45P97390 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.71□□□□□ -0.22
Vps45P97390 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.22
Vps45P97390 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps45P97390 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Vps45P97390 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.7□□□□□ -0.22
Vps45P97390 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps45P97390 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.7□□□□□ -0.22
Vps45P97390 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps45P97390 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps45P97390 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Vps45P97390 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps45P97390 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps45P97390 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps45P97390 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Vps45P97390 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.7□□□□□ -0.22
Vps45P97390 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps45P97390 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.7□□□□□ -0.22
Vps45P97390 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.7□□□□□ -0.22
Vps45P97390 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps45P97390 Gm38144-201ENSMUST00000192790 465 ntBASIC13.7□□□□□ -0.22
Vps45P97390 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps45P97390 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps45P97390 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps45P97390 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps45P97390 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps45P97390 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps45P97390 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps45P97390 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps45P97390 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps45P97390 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps45P97390 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps45P97390 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps45P97390 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Vps45P97390 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Vps45P97390 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.7□□□□□ -0.22
Vps45P97390 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.7□□□□□ -0.22
Vps45P97390 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps45P97390 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps45P97390 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Vps45P97390 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Vps45P97390 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
Vps45P97390 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps45P97390 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps45P97390 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps45P97390 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Vps45P97390 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps45P97390 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps45P97390 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.69□□□□□ -0.22
Vps45P97390 Gm12384-201ENSMUST00000119228 919 ntBASIC13.69□□□□□ -0.22
Vps45P97390 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms