Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lig3P97386 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lig3P97386 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lig3P97386 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lig3P97386 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Lig3P97386 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lig3P97386 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lig3P97386 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.5□□□□□ -0.09
Lig3P97386 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lig3P97386 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lig3P97386 Gm15236-201ENSMUST00000117309 379 ntBASIC14.5□□□□□ -0.09
Lig3P97386 Gm12384-201ENSMUST00000119228 919 ntBASIC14.5□□□□□ -0.09
Lig3P97386 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.5□□□□□ -0.09
Lig3P97386 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Lig3P97386 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.5□□□□□ -0.09
Lig3P97386 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lig3P97386 Gm18054-201ENSMUST00000207539 555 ntBASIC14.5□□□□□ -0.09
Lig3P97386 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lig3P97386 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.5□□□□□ -0.09
Lig3P97386 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lig3P97386 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Lig3P97386 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lig3P97386 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lig3P97386 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lig3P97386 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Lig3P97386 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.5□□□□□ -0.09
Lig3P97386 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lig3P97386 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lig3P97386 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lig3P97386 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
Lig3P97386 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.49□□□□□ -0.09
Lig3P97386 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lig3P97386 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lig3P97386 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lig3P97386 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lig3P97386 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.49□□□□□ -0.09
Lig3P97386 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lig3P97386 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lig3P97386 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lig3P97386 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lig3P97386 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lig3P97386 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.49□□□□□ -0.09
Lig3P97386 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lig3P97386 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lig3P97386 Gm16570-201ENSMUST00000161951 436 ntBASIC14.49□□□□□ -0.09
Lig3P97386 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Lig3P97386 Gm27514-201ENSMUST00000183692 110 ntBASIC14.49□□□□□ -0.09
Lig3P97386 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.49□□□□□ -0.09
Lig3P97386 Gm40466-201ENSMUST00000212174 422 ntBASIC14.49□□□□□ -0.09
Lig3P97386 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.49□□□□□ -0.09
Lig3P97386 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.49□□□□□ -0.09
Lig3P97386 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lig3P97386 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lig3P97386 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lig3P97386 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lig3P97386 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Lig3P97386 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lig3P97386 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lig3P97386 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Lig3P97386 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Lig3P97386 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.48□□□□□ -0.09
Lig3P97386 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Lig3P97386 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.48□□□□□ -0.09
Lig3P97386 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Gm18056-201ENSMUST00000207670 568 ntBASIC14.48□□□□□ -0.09
Lig3P97386 Gm18061-201ENSMUST00000208350 562 ntBASIC14.48□□□□□ -0.09
Lig3P97386 Gm18063-201ENSMUST00000208529 568 ntBASIC14.48□□□□□ -0.09
Lig3P97386 Gm18052-201ENSMUST00000208750 559 ntBASIC14.48□□□□□ -0.09
Lig3P97386 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.48□□□□□ -0.09
Lig3P97386 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.48□□□□□ -0.09
Lig3P97386 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Lig3P97386 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.48□□□□□ -0.09
Lig3P97386 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.48□□□□□ -0.09
Lig3P97386 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.48□□□□□ -0.09
Lig3P97386 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Lig3P97386 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.48□□□□□ -0.09
Lig3P97386 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Lig3P97386 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lig3P97386 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms