Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
PrkdcP97313 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC8.75□□□□□ -1.01
PrkdcP97313 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC8.75□□□□□ -1.01
PrkdcP97313 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC8.75□□□□□ -1.01
PrkdcP97313 Gm6905-201ENSMUST00000205729 511 ntBASIC8.75□□□□□ -1.01
PrkdcP97313 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
PrkdcP97313 AC164087.2-201ENSMUST00000216206 1072 ntBASIC8.75□□□□□ -1.01
PrkdcP97313 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC8.75□□□□□ -1.01
PrkdcP97313 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
PrkdcP97313 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
PrkdcP97313 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC8.75□□□□□ -1.01
PrkdcP97313 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC8.74□□□□□ -1.01
PrkdcP97313 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
PrkdcP97313 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
PrkdcP97313 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
PrkdcP97313 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
PrkdcP97313 AC165260.3-202ENSMUST00000224550 1031 ntBASIC8.74□□□□□ -1.01
PrkdcP97313 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
PrkdcP97313 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC8.74□□□□□ -1.01
PrkdcP97313 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
PrkdcP97313 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
PrkdcP97313 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
PrkdcP97313 Gm3283-201ENSMUST00000199319 1350 ntBASIC8.74□□□□□ -1.01
PrkdcP97313 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
PrkdcP97313 Gm12783-201ENSMUST00000121425 397 ntBASIC8.74□□□□□ -1.01
PrkdcP97313 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
PrkdcP97313 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
PrkdcP97313 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
PrkdcP97313 Gm18304-201ENSMUST00000189162 546 ntBASIC8.74□□□□□ -1.01
PrkdcP97313 AC153954.1-201ENSMUST00000216959 255 ntBASIC8.74□□□□□ -1.01
PrkdcP97313 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
PrkdcP97313 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
PrkdcP97313 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
PrkdcP97313 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
PrkdcP97313 AC166574.4-201ENSMUST00000227165 1937 ntBASIC8.74□□□□□ -1.01
PrkdcP97313 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC8.74□□□□□ -1.01
PrkdcP97313 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
PrkdcP97313 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
PrkdcP97313 Gm12516-201ENSMUST00000120819 385 ntBASIC8.74□□□□□ -1.01
PrkdcP97313 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
PrkdcP97313 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
PrkdcP97313 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC8.74□□□□□ -1.01
PrkdcP97313 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
PrkdcP97313 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC8.74□□□□□ -1.01
PrkdcP97313 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC8.74□□□□□ -1.01
PrkdcP97313 CT025553.1-201ENSMUST00000226292 299 ntBASIC8.74□□□□□ -1.01
PrkdcP97313 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
PrkdcP97313 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
PrkdcP97313 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
PrkdcP97313 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
PrkdcP97313 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC8.74□□□□□ -1.01
PrkdcP97313 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC8.74□□□□□ -1.01
PrkdcP97313 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
PrkdcP97313 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC8.74□□□□□ -1.01
PrkdcP97313 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC8.74□□□□□ -1.01
PrkdcP97313 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
PrkdcP97313 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC8.73□□□□□ -1.01
PrkdcP97313 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC8.73□□□□□ -1.01
PrkdcP97313 Gm12030-201ENSMUST00000121917 223 ntBASIC8.73□□□□□ -1.01
PrkdcP97313 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC8.73□□□□□ -1.01
PrkdcP97313 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC8.73□□□□□ -1.01
PrkdcP97313 Gm7985-201ENSMUST00000183329 981 ntBASIC8.73□□□□□ -1.01
PrkdcP97313 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Gm16380-201ENSMUST00000077997 478 ntBASIC8.73□□□□□ -1.01
PrkdcP97313 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
PrkdcP97313 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
PrkdcP97313 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC8.73□□□□□ -1.01
PrkdcP97313 Gm15352-201ENSMUST00000118696 270 ntBASIC8.73□□□□□ -1.01
PrkdcP97313 Gm11246-201ENSMUST00000120880 345 ntBASIC8.73□□□□□ -1.01
PrkdcP97313 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
PrkdcP97313 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC8.73□□□□□ -1.01
PrkdcP97313 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC8.73□□□□□ -1.01
PrkdcP97313 Gm44421-201ENSMUST00000205064 1221 ntBASIC8.73□□□□□ -1.01
PrkdcP97313 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC8.73□□□□□ -1.01
PrkdcP97313 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC8.73□□□□□ -1.01
PrkdcP97313 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC8.73□□□□□ -1.01
PrkdcP97313 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
PrkdcP97313 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Gm13019-201ENSMUST00000120000 276 ntBASIC8.73□□□□□ -1.01
PrkdcP97313 Gm18706-201ENSMUST00000210053 1066 ntBASIC8.73□□□□□ -1.01
PrkdcP97313 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PrkdcP97313 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms