Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.83□□□□□ -0.52
SgcbP82349 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
SgcbP82349 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SgcbP82349 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.83□□□□□ -0.52
SgcbP82349 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SgcbP82349 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
SgcbP82349 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcbP82349 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.82□□□□□ -0.52
SgcbP82349 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.82□□□□□ -0.52
SgcbP82349 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
SgcbP82349 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SgcbP82349 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcbP82349 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SgcbP82349 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
SgcbP82349 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SgcbP82349 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcbP82349 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SgcbP82349 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcbP82349 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SgcbP82349 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcbP82349 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcbP82349 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.82□□□□□ -0.52
SgcbP82349 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.82□□□□□ -0.52
SgcbP82349 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.82□□□□□ -0.52
SgcbP82349 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SgcbP82349 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.82□□□□□ -0.52
SgcbP82349 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcbP82349 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcbP82349 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
SgcbP82349 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.82□□□□□ -0.52
SgcbP82349 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.82□□□□□ -0.52
SgcbP82349 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SgcbP82349 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.82□□□□□ -0.52
SgcbP82349 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.82□□□□□ -0.52
SgcbP82349 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.82□□□□□ -0.52
SgcbP82349 Gm43433-201ENSMUST00000196573 481 ntBASIC11.82□□□□□ -0.52
SgcbP82349 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.82□□□□□ -0.52
SgcbP82349 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcbP82349 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.82□□□□□ -0.52
SgcbP82349 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.82□□□□□ -0.52
SgcbP82349 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.82□□□□□ -0.52
SgcbP82349 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcbP82349 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SgcbP82349 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcbP82349 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SgcbP82349 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SgcbP82349 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcbP82349 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
SgcbP82349 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcbP82349 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcbP82349 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcbP82349 AC154849.3-201ENSMUST00000223733 1660 ntBASIC11.81□□□□□ -0.52
SgcbP82349 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.81□□□□□ -0.52
SgcbP82349 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcbP82349 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SgcbP82349 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcbP82349 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcbP82349 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcbP82349 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SgcbP82349 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SgcbP82349 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.81□□□□□ -0.52
SgcbP82349 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
SgcbP82349 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcbP82349 Mir874-201ENSMUST00000104769 76 ntBASIC11.81□□□□□ -0.52
SgcbP82349 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.81□□□□□ -0.52
SgcbP82349 Gm11814-201ENSMUST00000119515 929 ntBASIC11.81□□□□□ -0.52
SgcbP82349 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcbP82349 Gm25116-201ENSMUST00000157191 122 ntBASIC11.81□□□□□ -0.52
SgcbP82349 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcbP82349 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.81□□□□□ -0.52
SgcbP82349 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcbP82349 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.81□□□□□ -0.52
SgcbP82349 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.81□□□□□ -0.52
SgcbP82349 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.81□□□□□ -0.52
SgcbP82349 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SgcbP82349 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.81□□□□□ -0.52
SgcbP82349 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC11.81□□□□□ -0.52
SgcbP82349 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SgcbP82349 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcbP82349 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcbP82349 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.81□□□□□ -0.52
SgcbP82349 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
SgcbP82349 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcbP82349 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcbP82349 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.81□□□□□ -0.52
SgcbP82349 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcbP82349 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcbP82349 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcbP82349 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms