Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Abcd3P55096 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Abcd3P55096 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abcd3P55096 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abcd3P55096 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abcd3P55096 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abcd3P55096 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Abcd3P55096 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abcd3P55096 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abcd3P55096 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abcd3P55096 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abcd3P55096 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abcd3P55096 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.87□□□□□ -0.51
Abcd3P55096 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.87□□□□□ -0.51
Abcd3P55096 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.87□□□□□ -0.51
Abcd3P55096 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.87□□□□□ -0.51
Abcd3P55096 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.87□□□□□ -0.51
Abcd3P55096 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.87□□□□□ -0.51
Abcd3P55096 Gm27437-201ENSMUST00000183429 107 ntBASIC11.87□□□□□ -0.51
Abcd3P55096 Gm5745-201ENSMUST00000183748 313 ntBASIC11.87□□□□□ -0.51
Abcd3P55096 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.87□□□□□ -0.51
Abcd3P55096 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.87□□□□□ -0.51
Abcd3P55096 Gm18307-201ENSMUST00000206864 949 ntBASIC11.87□□□□□ -0.51
Abcd3P55096 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.87□□□□□ -0.51
Abcd3P55096 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Abcd3P55096 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abcd3P55096 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.87□□□□□ -0.51
Abcd3P55096 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.87□□□□□ -0.51
Abcd3P55096 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abcd3P55096 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Abcd3P55096 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.87□□□□□ -0.51
Abcd3P55096 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abcd3P55096 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Abcd3P55096 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abcd3P55096 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abcd3P55096 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Abcd3P55096 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abcd3P55096 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abcd3P55096 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abcd3P55096 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abcd3P55096 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abcd3P55096 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Abcd3P55096 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Abcd3P55096 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abcd3P55096 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Abcd3P55096 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.87□□□□□ -0.51
Abcd3P55096 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abcd3P55096 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abcd3P55096 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.86□□□□□ -0.51
Abcd3P55096 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Abcd3P55096 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Abcd3P55096 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Abcd3P55096 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 Gm15371-201ENSMUST00000117057 784 ntBASIC11.86□□□□□ -0.51
Abcd3P55096 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.86□□□□□ -0.51
Abcd3P55096 Gm37917-201ENSMUST00000194711 392 ntBASIC11.86□□□□□ -0.51
Abcd3P55096 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 Gm2423-201ENSMUST00000074863 733 ntBASIC11.86□□□□□ -0.51
Abcd3P55096 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.86□□□□□ -0.51
Abcd3P55096 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.86□□□□□ -0.51
Abcd3P55096 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Abcd3P55096 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Abcd3P55096 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Abcd3P55096 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Abcd3P55096 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Abcd3P55096 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Abcd3P55096 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Abcd3P55096 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.85□□□□□ -0.51
Abcd3P55096 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Abcd3P55096 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.85□□□□□ -0.51
Abcd3P55096 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Abcd3P55096 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Abcd3P55096 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.85□□□□□ -0.51
Abcd3P55096 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Abcd3P55096 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms