Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx6P54823 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx6P54823 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx6P54823 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx6P54823 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx6P54823 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx6P54823 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx6P54823 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx6P54823 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx6P54823 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ddx6P54823 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx6P54823 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx6P54823 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ddx6P54823 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.43□□□□□ -0.26
Ddx6P54823 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx6P54823 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx6P54823 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ddx6P54823 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx6P54823 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx6P54823 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.42□□□□□ -0.26
Ddx6P54823 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ddx6P54823 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx6P54823 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx6P54823 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx6P54823 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx6P54823 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx6P54823 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Ddx6P54823 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx6P54823 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx6P54823 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx6P54823 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx6P54823 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx6P54823 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx6P54823 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.42□□□□□ -0.26
Ddx6P54823 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx6P54823 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.42□□□□□ -0.26
Ddx6P54823 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx6P54823 Gm2991-201ENSMUST00000173338 480 ntBASIC13.42□□□□□ -0.26
Ddx6P54823 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.42□□□□□ -0.26
Ddx6P54823 Gm27243-201ENSMUST00000183964 521 ntBASIC13.42□□□□□ -0.26
Ddx6P54823 Gm6334-201ENSMUST00000207083 228 ntBASIC13.42□□□□□ -0.26
Ddx6P54823 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.42□□□□□ -0.26
Ddx6P54823 Gm21769-201ENSMUST00000211922 111 ntBASIC13.42□□□□□ -0.26
Ddx6P54823 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.42□□□□□ -0.26
Ddx6P54823 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.42□□□□□ -0.26
Ddx6P54823 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx6P54823 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx6P54823 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.42□□□□□ -0.26
Ddx6P54823 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx6P54823 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx6P54823 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx6P54823 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx6P54823 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx6P54823 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.42□□□□□ -0.26
Ddx6P54823 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ddx6P54823 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx6P54823 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx6P54823 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Ddx6P54823 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx6P54823 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx6P54823 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx6P54823 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx6P54823 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx6P54823 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx6P54823 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx6P54823 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx6P54823 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx6P54823 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx6P54823 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ddx6P54823 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx6P54823 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx6P54823 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx6P54823 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx6P54823 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx6P54823 Gm11222-201ENSMUST00000119005 738 ntBASIC13.41□□□□□ -0.26
Ddx6P54823 Gm14381-201ENSMUST00000122105 414 ntBASIC13.41□□□□□ -0.26
Ddx6P54823 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx6P54823 Gm22121-201ENSMUST00000175148 54 ntBASIC13.41□□□□□ -0.26
Ddx6P54823 Gm6621-201ENSMUST00000193251 772 ntBASIC13.41□□□□□ -0.26
Ddx6P54823 Gm8099-201ENSMUST00000200510 742 ntBASIC13.41□□□□□ -0.26
Ddx6P54823 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Ddx6P54823 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.41□□□□□ -0.26
Ddx6P54823 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ddx6P54823 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx6P54823 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx6P54823 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx6P54823 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx6P54823 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.41□□□□□ -0.26
Ddx6P54823 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx6P54823 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Ddx6P54823 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx6P54823 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.41□□□□□ -0.26
Ddx6P54823 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx6P54823 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx6P54823 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx6P54823 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.4□□□□□ -0.26
Ddx6P54823 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx6P54823 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx6P54823 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx6P54823 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms