Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
Shmt1P50431 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt1P50431 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt1P50431 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt1P50431 Gm9200-201ENSMUST00000118513 1354 ntBASIC14□□□□□ -0.17
Shmt1P50431 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt1P50431 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14□□□□□ -0.17
Shmt1P50431 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt1P50431 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shmt1P50431 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14□□□□□ -0.17
Shmt1P50431 Gm4271-201ENSMUST00000174444 973 ntBASIC14□□□□□ -0.17
Shmt1P50431 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14□□□□□ -0.17
Shmt1P50431 Gm16372-201ENSMUST00000073088 450 ntBASIC14□□□□□ -0.17
Shmt1P50431 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt1P50431 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Shmt1P50431 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt1P50431 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Shmt1P50431 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt1P50431 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14□□□□□ -0.17
Shmt1P50431 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt1P50431 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt1P50431 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt1P50431 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14□□□□□ -0.17
Shmt1P50431 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Shmt1P50431 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt1P50431 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt1P50431 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt1P50431 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt1P50431 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt1P50431 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.99□□□□□ -0.17
Shmt1P50431 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt1P50431 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt1P50431 Gm11978-201ENSMUST00000122315 466 ntBASIC13.99□□□□□ -0.17
Shmt1P50431 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.99□□□□□ -0.17
Shmt1P50431 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt1P50431 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt1P50431 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.99□□□□□ -0.17
Shmt1P50431 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Shmt1P50431 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt1P50431 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt1P50431 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt1P50431 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.99□□□□□ -0.17
Shmt1P50431 Gm40466-201ENSMUST00000212174 422 ntBASIC13.99□□□□□ -0.17
Shmt1P50431 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
Shmt1P50431 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt1P50431 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt1P50431 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.99□□□□□ -0.17
Shmt1P50431 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt1P50431 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt1P50431 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.99□□□□□ -0.17
Shmt1P50431 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Shmt1P50431 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt1P50431 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt1P50431 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt1P50431 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt1P50431 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt1P50431 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt1P50431 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt1P50431 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt1P50431 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Shmt1P50431 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt1P50431 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Shmt1P50431 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Shmt1P50431 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Shmt1P50431 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt1P50431 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt1P50431 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt1P50431 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt1P50431 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt1P50431 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt1P50431 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.98□□□□□ -0.17
Shmt1P50431 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt1P50431 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt1P50431 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.98□□□□□ -0.17
Shmt1P50431 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.98□□□□□ -0.17
Shmt1P50431 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Shmt1P50431 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt1P50431 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.98□□□□□ -0.17
Shmt1P50431 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.98□□□□□ -0.17
Shmt1P50431 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.98□□□□□ -0.17
Shmt1P50431 Mir6420-201ENSMUST00000185032 102 ntBASIC13.98□□□□□ -0.17
Shmt1P50431 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.98□□□□□ -0.17
Shmt1P50431 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt1P50431 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt1P50431 Gm10146-201ENSMUST00000072739 309 ntBASIC13.98□□□□□ -0.17
Shmt1P50431 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt1P50431 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt1P50431 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt1P50431 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt1P50431 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Shmt1P50431 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt1P50431 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt1P50431 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt1P50431 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.98□□□□□ -0.17
Shmt1P50431 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt1P50431 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt1P50431 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt1P50431 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.98□□□□□ -0.17
Shmt1P50431 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt1P50431 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms