Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc3P49135 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Ercc3P49135 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc3P49135 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc3P49135 Gm11803-201ENSMUST00000119966 444 ntBASIC15.73■□□□□ 0.11
Ercc3P49135 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.73■□□□□ 0.11
Ercc3P49135 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc3P49135 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.73■□□□□ 0.11
Ercc3P49135 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.73■□□□□ 0.11
Ercc3P49135 Proscos-202ENSMUST00000178990 666 ntBASIC15.73■□□□□ 0.11
Ercc3P49135 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.73■□□□□ 0.11
Ercc3P49135 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc3P49135 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc3P49135 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.73■□□□□ 0.11
Ercc3P49135 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc3P49135 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc3P49135 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc3P49135 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc3P49135 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.73■□□□□ 0.11
Ercc3P49135 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc3P49135 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.73■□□□□ 0.11
Ercc3P49135 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ercc3P49135 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.72■□□□□ 0.11
Ercc3P49135 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.72■□□□□ 0.11
Ercc3P49135 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.72■□□□□ 0.11
Ercc3P49135 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ercc3P49135 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.72■□□□□ 0.11
Ercc3P49135 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Gm14350-201ENSMUST00000116642 640 ntBASIC15.72■□□□□ 0.11
Ercc3P49135 Gm13612-201ENSMUST00000119276 390 ntBASIC15.72■□□□□ 0.11
Ercc3P49135 Mir1894-201ENSMUST00000122802 81 ntBASIC15.72■□□□□ 0.11
Ercc3P49135 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.72■□□□□ 0.11
Ercc3P49135 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.72■□□□□ 0.11
Ercc3P49135 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Itm2b-204ENSMUST00000228637 783 ntBASIC15.72■□□□□ 0.11
Ercc3P49135 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.72■□□□□ 0.11
Ercc3P49135 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.72■□□□□ 0.11
Ercc3P49135 Mbnl2-204ENSMUST00000227012 2390 ntBASIC15.72■□□□□ 0.11
Ercc3P49135 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.72■□□□□ 0.11
Ercc3P49135 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
Ercc3P49135 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ercc3P49135 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc3P49135 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc3P49135 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Ercc3P49135 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc3P49135 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.71■□□□□ 0.11
Ercc3P49135 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc3P49135 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc3P49135 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc3P49135 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc3P49135 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc3P49135 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc3P49135 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc3P49135 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC15.71■□□□□ 0.11
Ercc3P49135 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ercc3P49135 Gm8810-201ENSMUST00000172895 754 ntBASIC15.71■□□□□ 0.11
Ercc3P49135 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ercc3P49135 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ercc3P49135 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.71■□□□□ 0.11
Ercc3P49135 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc3P49135 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc3P49135 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc3P49135 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc3P49135 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc3P49135 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ercc3P49135 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ercc3P49135 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ercc3P49135 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Ercc3P49135 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC15.71■□□□□ 0.1
Ercc3P49135 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
Ercc3P49135 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms