Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prox1P48437 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.73□□□□□ -0.37
Prox1P48437 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.73□□□□□ -0.37
Prox1P48437 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prox1P48437 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Prox1P48437 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prox1P48437 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.73□□□□□ -0.37
Prox1P48437 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Prox1P48437 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.72□□□□□ -0.37
Prox1P48437 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 Gm24543-201ENSMUST00000103867 82 ntBASIC12.72□□□□□ -0.37
Prox1P48437 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 Gm14057-201ENSMUST00000120631 482 ntBASIC12.72□□□□□ -0.37
Prox1P48437 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.72□□□□□ -0.37
Prox1P48437 Mir6956-201ENSMUST00000183598 62 ntBASIC12.72□□□□□ -0.37
Prox1P48437 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 Matn2-203ENSMUST00000226766 3252 ntBASIC12.72□□□□□ -0.37
Prox1P48437 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Prox1P48437 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Prox1P48437 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prox1P48437 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Prox1P48437 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Prox1P48437 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prox1P48437 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prox1P48437 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Prox1P48437 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Prox1P48437 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Prox1P48437 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prox1P48437 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Prox1P48437 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prox1P48437 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prox1P48437 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prox1P48437 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Prox1P48437 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Prox1P48437 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Prox1P48437 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prox1P48437 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prox1P48437 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prox1P48437 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.71□□□□□ -0.37
Prox1P48437 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Prox1P48437 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Prox1P48437 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prox1P48437 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prox1P48437 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prox1P48437 Gm22065-201ENSMUST00000103753 110 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Gm22066-201ENSMUST00000103761 110 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Gm24932-201ENSMUST00000103763 110 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Gm24115-201ENSMUST00000103799 110 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Gm22190-201ENSMUST00000103827 110 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Gm22191-201ENSMUST00000103831 110 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Gm24721-201ENSMUST00000103849 110 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Gm28018-201ENSMUST00000103869 110 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Gm26399-201ENSMUST00000103937 110 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.71□□□□□ -0.37
Prox1P48437 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prox1P48437 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Prox1P48437 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.71□□□□□ -0.37
Prox1P48437 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Prox1P48437 Gm25349-201ENSMUST00000177728 110 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Gm23616-201ENSMUST00000177797 110 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Gm25871-201ENSMUST00000177816 110 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Gm24752-201ENSMUST00000178240 110 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Gm24496-201ENSMUST00000178287 110 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Gm25649-201ENSMUST00000178476 110 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Gm25548-201ENSMUST00000178681 110 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Gm23147-201ENSMUST00000178841 110 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Gm26095-201ENSMUST00000179270 110 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Gm22171-201ENSMUST00000179283 110 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Gm23936-201ENSMUST00000179354 110 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Gm22619-201ENSMUST00000179516 110 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Gm25255-201ENSMUST00000179579 110 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Gm24755-201ENSMUST00000179691 110 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Gm26506-201ENSMUST00000179692 110 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Gm25086-201ENSMUST00000179931 110 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Gm23243-201ENSMUST00000180047 110 ntBASIC12.71□□□□□ -0.37
Prox1P48437 Gm24659-201ENSMUST00000180212 110 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms