Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.99□□□□□ -0.49
Rfx3P48381 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.99□□□□□ -0.49
Rfx3P48381 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.99□□□□□ -0.49
Rfx3P48381 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.99□□□□□ -0.49
Rfx3P48381 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.99□□□□□ -0.49
Rfx3P48381 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.99□□□□□ -0.49
Rfx3P48381 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rfx3P48381 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfx3P48381 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.98□□□□□ -0.49
Rfx3P48381 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfx3P48381 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfx3P48381 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Rfx3P48381 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rfx3P48381 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rfx3P48381 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rfx3P48381 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfx3P48381 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rfx3P48381 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.98□□□□□ -0.49
Rfx3P48381 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rfx3P48381 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Rfx3P48381 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfx3P48381 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfx3P48381 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfx3P48381 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Rfx3P48381 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfx3P48381 Gm15240-201ENSMUST00000118156 720 ntBASIC11.98□□□□□ -0.49
Rfx3P48381 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rfx3P48381 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.98□□□□□ -0.49
Rfx3P48381 Mir8102-201ENSMUST00000184148 139 ntBASIC11.98□□□□□ -0.49
Rfx3P48381 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rfx3P48381 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfx3P48381 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rfx3P48381 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfx3P48381 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfx3P48381 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rfx3P48381 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rfx3P48381 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rfx3P48381 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfx3P48381 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.98□□□□□ -0.49
Rfx3P48381 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Rfx3P48381 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfx3P48381 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfx3P48381 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.98□□□□□ -0.49
Rfx3P48381 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rfx3P48381 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Rfx3P48381 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.97□□□□□ -0.49
Rfx3P48381 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfx3P48381 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfx3P48381 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfx3P48381 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfx3P48381 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfx3P48381 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfx3P48381 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfx3P48381 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rfx3P48381 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Rfx3P48381 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfx3P48381 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.97□□□□□ -0.49
Rfx3P48381 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.97□□□□□ -0.49
Rfx3P48381 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Rfx3P48381 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rfx3P48381 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rfx3P48381 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rfx3P48381 Gm9522-201ENSMUST00000182394 926 ntBASIC11.97□□□□□ -0.49
Rfx3P48381 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.97□□□□□ -0.49
Rfx3P48381 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rfx3P48381 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rfx3P48381 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfx3P48381 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfx3P48381 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfx3P48381 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Rfx3P48381 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rfx3P48381 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Rfx3P48381 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.97□□□□□ -0.49
Rfx3P48381 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfx3P48381 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rfx3P48381 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Rfx3P48381 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfx3P48381 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfx3P48381 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfx3P48381 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms