Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Xcl1P47993 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC8.54□□□□□ -1.04
Xcl1P47993 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Xcl1P47993 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Xcl1P47993 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Xcl1P47993 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC8.54□□□□□ -1.04
Xcl1P47993 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
Xcl1P47993 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC8.53□□□□□ -1.04
Xcl1P47993 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Xcl1P47993 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Gm42863-201ENSMUST00000197875 2958 ntBASIC8.53□□□□□ -1.04
Xcl1P47993 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Xcl1P47993 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC8.53□□□□□ -1.04
Xcl1P47993 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC8.53□□□□□ -1.04
Xcl1P47993 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC8.53□□□□□ -1.04
Xcl1P47993 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC8.53□□□□□ -1.04
Xcl1P47993 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Gm18262-201ENSMUST00000222560 1946 ntBASIC8.53□□□□□ -1.04
Xcl1P47993 Gm44401-201ENSMUST00000204462 2375 ntBASIC8.53□□□□□ -1.04
Xcl1P47993 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Gm4459-201ENSMUST00000118750 468 ntBASIC8.53□□□□□ -1.04
Xcl1P47993 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC8.53□□□□□ -1.04
Xcl1P47993 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC8.53□□□□□ -1.04
Xcl1P47993 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC8.53□□□□□ -1.04
Xcl1P47993 Rprl3-201ENSMUST00000157400 290 ntBASIC8.53□□□□□ -1.04
Xcl1P47993 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC8.53□□□□□ -1.04
Xcl1P47993 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Gm37230-201ENSMUST00000194491 818 ntBASIC8.53□□□□□ -1.04
Xcl1P47993 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC8.53□□□□□ -1.04
Xcl1P47993 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC8.53□□□□□ -1.04
Xcl1P47993 CT030704.2-201ENSMUST00000228887 494 ntBASIC8.53□□□□□ -1.04
Xcl1P47993 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Gm14452-201ENSMUST00000118680 1632 ntBASIC8.53□□□□□ -1.04
Xcl1P47993 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC8.53□□□□□ -1.04
Xcl1P47993 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Xcl1P47993 Gm18983-201ENSMUST00000222884 2729 ntBASIC8.52□□□□□ -1.04
Xcl1P47993 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC8.52□□□□□ -1.04
Xcl1P47993 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Xcl1P47993 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC8.52□□□□□ -1.04
Xcl1P47993 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.04
Xcl1P47993 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC8.52□□□□□ -1.04
Xcl1P47993 AC164565.1-201ENSMUST00000217520 1484 ntBASIC8.52□□□□□ -1.05
Xcl1P47993 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Xcl1P47993 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Xcl1P47993 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC8.52□□□□□ -1.05
Xcl1P47993 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC8.52□□□□□ -1.05
Xcl1P47993 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Xcl1P47993 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC8.52□□□□□ -1.05
Xcl1P47993 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Xcl1P47993 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC8.52□□□□□ -1.05
Xcl1P47993 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Xcl1P47993 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Xcl1P47993 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Xcl1P47993 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Xcl1P47993 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Xcl1P47993 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Xcl1P47993 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Xcl1P47993 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Xcl1P47993 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC8.52□□□□□ -1.05
Xcl1P47993 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Xcl1P47993 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Xcl1P47993 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Xcl1P47993 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Xcl1P47993 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Xcl1P47993 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Xcl1P47993 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Xcl1P47993 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC8.52□□□□□ -1.05
Xcl1P47993 Gm44454-201ENSMUST00000198541 138 ntBASIC8.52□□□□□ -1.05
Xcl1P47993 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms