Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf4P43488 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf4P43488 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Tnfsf4P43488 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Tnfsf4P43488 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf4P43488 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf4P43488 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf4P43488 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf4P43488 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Tnfsf4P43488 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Tnfsf4P43488 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf4P43488 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.81□□□□□ -0.36
Tnfsf4P43488 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf4P43488 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf4P43488 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf4P43488 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.8□□□□□ -0.36
Tnfsf4P43488 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.8□□□□□ -0.36
Tnfsf4P43488 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.8□□□□□ -0.36
Tnfsf4P43488 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Gm5161-201ENSMUST00000075243 853 ntBASIC12.8□□□□□ -0.36
Tnfsf4P43488 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.8□□□□□ -0.36
Tnfsf4P43488 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf4P43488 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf4P43488 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Tnfsf4P43488 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf4P43488 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms