Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh4P39038 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.7□□□□□ -0.38
Cdh4P39038 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh4P39038 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cdh4P39038 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cdh4P39038 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.69□□□□□ -0.38
Cdh4P39038 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.69□□□□□ -0.38
Cdh4P39038 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cdh4P39038 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.69□□□□□ -0.38
Cdh4P39038 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Gm13612-201ENSMUST00000119276 390 ntBASIC12.69□□□□□ -0.38
Cdh4P39038 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cdh4P39038 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.69□□□□□ -0.38
Cdh4P39038 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Cdh4P39038 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.69□□□□□ -0.38
Cdh4P39038 Gm5035-201ENSMUST00000215581 927 ntBASIC12.69□□□□□ -0.38
Cdh4P39038 Gm5186-201ENSMUST00000218781 920 ntBASIC12.69□□□□□ -0.38
Cdh4P39038 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Cdh4P39038 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.69□□□□□ -0.38
Cdh4P39038 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cdh4P39038 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cdh4P39038 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.69□□□□□ -0.38
Cdh4P39038 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cdh4P39038 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.69□□□□□ -0.38
Cdh4P39038 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cdh4P39038 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh4P39038 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh4P39038 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh4P39038 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh4P39038 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh4P39038 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Cdh4P39038 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh4P39038 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh4P39038 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.68□□□□□ -0.38
Cdh4P39038 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Cdh4P39038 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.68□□□□□ -0.38
Cdh4P39038 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.68□□□□□ -0.38
Cdh4P39038 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh4P39038 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.68□□□□□ -0.38
Cdh4P39038 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh4P39038 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh4P39038 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh4P39038 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.68□□□□□ -0.38
Cdh4P39038 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Cdh4P39038 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.68□□□□□ -0.38
Cdh4P39038 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh4P39038 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh4P39038 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.68□□□□□ -0.38
Cdh4P39038 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh4P39038 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.68□□□□□ -0.38
Cdh4P39038 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cdh4P39038 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh4P39038 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.68□□□□□ -0.38
Cdh4P39038 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh4P39038 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh4P39038 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh4P39038 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Cdh4P39038 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh4P39038 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh4P39038 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms