Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp13P33435 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp13P33435 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp13P33435 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Mmp13P33435 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Mmp13P33435 Gm22189-201ENSMUST00000103822 86 ntBASIC13.58□□□□□ -0.24
Mmp13P33435 Gm15770-201ENSMUST00000117498 584 ntBASIC13.58□□□□□ -0.24
Mmp13P33435 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Mmp13P33435 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.58□□□□□ -0.24
Mmp13P33435 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Mmp13P33435 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp13P33435 Gm24420-201ENSMUST00000176676 59 ntBASIC13.58□□□□□ -0.24
Mmp13P33435 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.58□□□□□ -0.24
Mmp13P33435 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.58□□□□□ -0.24
Mmp13P33435 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Mmp13P33435 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.58□□□□□ -0.24
Mmp13P33435 Gm17795-201ENSMUST00000214505 757 ntBASIC13.58□□□□□ -0.24
Mmp13P33435 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.58□□□□□ -0.24
Mmp13P33435 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.58□□□□□ -0.24
Mmp13P33435 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.58□□□□□ -0.24
Mmp13P33435 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp13P33435 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Mmp13P33435 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp13P33435 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp13P33435 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp13P33435 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp13P33435 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp13P33435 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Mmp13P33435 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp13P33435 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.58□□□□□ -0.24
Mmp13P33435 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.58□□□□□ -0.24
Mmp13P33435 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp13P33435 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp13P33435 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp13P33435 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Mmp13P33435 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp13P33435 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Mmp13P33435 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp13P33435 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp13P33435 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp13P33435 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp13P33435 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp13P33435 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp13P33435 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp13P33435 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp13P33435 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.57□□□□□ -0.24
Mmp13P33435 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp13P33435 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Mmp13P33435 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp13P33435 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Mmp13P33435 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp13P33435 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp13P33435 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp13P33435 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp13P33435 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp13P33435 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Mmp13P33435 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp13P33435 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Mmp13P33435 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.57□□□□□ -0.24
Mmp13P33435 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp13P33435 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.57□□□□□ -0.24
Mmp13P33435 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.57□□□□□ -0.24
Mmp13P33435 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.57□□□□□ -0.24
Mmp13P33435 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp13P33435 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Mmp13P33435 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp13P33435 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp13P33435 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp13P33435 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp13P33435 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp13P33435 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp13P33435 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp13P33435 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp13P33435 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.57□□□□□ -0.24
Mmp13P33435 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Mmp13P33435 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Mmp13P33435 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp13P33435 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp13P33435 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp13P33435 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp13P33435 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.56□□□□□ -0.24
Mmp13P33435 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp13P33435 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Mmp13P33435 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Mmp13P33435 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp13P33435 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp13P33435 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp13P33435 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp13P33435 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp13P33435 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp13P33435 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp13P33435 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp13P33435 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp13P33435 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.56□□□□□ -0.24
Mmp13P33435 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp13P33435 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp13P33435 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
Mmp13P33435 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.56□□□□□ -0.24
Mmp13P33435 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Mmp13P33435 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms