Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nedd8P29595 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Nedd8P29595 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nedd8P29595 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nedd8P29595 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.21□□□□□ -0.46
Nedd8P29595 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nedd8P29595 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.21□□□□□ -0.46
Nedd8P29595 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nedd8P29595 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nedd8P29595 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nedd8P29595 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Nedd8P29595 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nedd8P29595 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Nedd8P29595 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nedd8P29595 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nedd8P29595 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nedd8P29595 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nedd8P29595 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nedd8P29595 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nedd8P29595 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nedd8P29595 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nedd8P29595 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nedd8P29595 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nedd8P29595 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.2□□□□□ -0.46
Nedd8P29595 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nedd8P29595 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nedd8P29595 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nedd8P29595 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nedd8P29595 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nedd8P29595 Gm7153-201ENSMUST00000117092 455 ntBASIC12.2□□□□□ -0.46
Nedd8P29595 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nedd8P29595 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.2□□□□□ -0.46
Nedd8P29595 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nedd8P29595 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.2□□□□□ -0.46
Nedd8P29595 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.2□□□□□ -0.46
Nedd8P29595 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.2□□□□□ -0.46
Nedd8P29595 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nedd8P29595 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nedd8P29595 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.2□□□□□ -0.46
Nedd8P29595 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.2□□□□□ -0.46
Nedd8P29595 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.2□□□□□ -0.46
Nedd8P29595 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nedd8P29595 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nedd8P29595 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Nedd8P29595 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nedd8P29595 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.2□□□□□ -0.46
Nedd8P29595 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nedd8P29595 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nedd8P29595 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nedd8P29595 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nedd8P29595 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.19□□□□□ -0.46
Nedd8P29595 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.19□□□□□ -0.46
Nedd8P29595 Mir698-201ENSMUST00000102164 109 ntBASIC12.19□□□□□ -0.46
Nedd8P29595 Gm5177-201ENSMUST00000183092 997 ntBASIC12.19□□□□□ -0.46
Nedd8P29595 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.19□□□□□ -0.46
Nedd8P29595 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.19□□□□□ -0.46
Nedd8P29595 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.19□□□□□ -0.46
Nedd8P29595 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
Nedd8P29595 AV026068-213ENSMUST00000223675 1171 ntBASIC12.19□□□□□ -0.46
Nedd8P29595 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 BC001981-202ENSMUST00000191393 1545 ntBASIC12.19□□□□□ -0.46
Nedd8P29595 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.19□□□□□ -0.46
Nedd8P29595 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
Nedd8P29595 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nedd8P29595 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nedd8P29595 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nedd8P29595 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Nedd8P29595 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Nedd8P29595 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms