Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Vcam1P29533 Gm27320-201ENSMUST00000184892 109 ntBASIC15.14■□□□□ 0.01
Vcam1P29533 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC15.14■□□□□ 0.01
Vcam1P29533 Gm8176-201ENSMUST00000191297 1099 ntBASIC15.14■□□□□ 0.01
Vcam1P29533 Gm38000-201ENSMUST00000192390 1215 ntBASIC15.14■□□□□ 0.01
Vcam1P29533 Gm38092-201ENSMUST00000195600 653 ntBASIC15.14■□□□□ 0.01
Vcam1P29533 Gm43416-201ENSMUST00000201916 1015 ntBASIC15.14■□□□□ 0.01
Vcam1P29533 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC15.14■□□□□ 0.01
Vcam1P29533 CT485787.1-201ENSMUST00000225617 968 ntBASIC15.14■□□□□ 0.01
Vcam1P29533 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Vcam1P29533 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.14■□□□□ 0.01
Vcam1P29533 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcam1P29533 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcam1P29533 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcam1P29533 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vcam1P29533 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.13■□□□□ 0.01
Vcam1P29533 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vcam1P29533 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcam1P29533 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.13■□□□□ 0.01
Vcam1P29533 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcam1P29533 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC15.13■□□□□ 0.01
Vcam1P29533 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcam1P29533 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcam1P29533 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcam1P29533 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vcam1P29533 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcam1P29533 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcam1P29533 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vcam1P29533 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcam1P29533 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Vcam1P29533 Gm10434-201ENSMUST00000101158 471 ntBASIC15.13■□□□□ 0.01
Vcam1P29533 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcam1P29533 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vcam1P29533 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC15.13■□□□□ 0.01
Vcam1P29533 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcam1P29533 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC15.13■□□□□ 0.01
Vcam1P29533 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.13■□□□□ 0.01
Vcam1P29533 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vcam1P29533 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.13■□□□□ 0.01
Vcam1P29533 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Vcam1P29533 Gm20482-202ENSMUST00000174729 825 ntBASIC15.13■□□□□ 0.01
Vcam1P29533 Gm19931-201ENSMUST00000198920 368 ntBASIC15.13■□□□□ 0.01
Vcam1P29533 Gm6082-201ENSMUST00000215204 454 ntBASIC15.13■□□□□ 0.01
Vcam1P29533 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Vcam1P29533 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vcam1P29533 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcam1P29533 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vcam1P29533 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcam1P29533 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcam1P29533 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcam1P29533 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcam1P29533 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.12■□□□□ 0.01
Vcam1P29533 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcam1P29533 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcam1P29533 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcam1P29533 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcam1P29533 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcam1P29533 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vcam1P29533 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.12■□□□□ 0.01
Vcam1P29533 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcam1P29533 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcam1P29533 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcam1P29533 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.12■□□□□ 0.01
Vcam1P29533 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.12■□□□□ 0.01
Vcam1P29533 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.12■□□□□ 0.01
Vcam1P29533 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.12■□□□□ 0.01
Vcam1P29533 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.12■□□□□ 0.01
Vcam1P29533 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcam1P29533 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcam1P29533 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC15.12■□□□□ 0.01
Vcam1P29533 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcam1P29533 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcam1P29533 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcam1P29533 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcam1P29533 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcam1P29533 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcam1P29533 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC15.12■□□□□ 0.01
Vcam1P29533 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcam1P29533 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms