Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl6P27784 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Ccl6P27784 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Ccl6P27784 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.34□□□□□ -0.75
Ccl6P27784 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl6P27784 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl6P27784 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl6P27784 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl6P27784 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
Ccl6P27784 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl6P27784 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl6P27784 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl6P27784 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Ccl6P27784 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.34□□□□□ -0.75
Ccl6P27784 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl6P27784 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl6P27784 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl6P27784 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Ccl6P27784 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl6P27784 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl6P27784 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC10.34□□□□□ -0.75
Ccl6P27784 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl6P27784 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl6P27784 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Ccl6P27784 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl6P27784 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl6P27784 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl6P27784 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl6P27784 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl6P27784 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Ccl6P27784 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl6P27784 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Ccl6P27784 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Ccl6P27784 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.75
Ccl6P27784 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl6P27784 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Ccl6P27784 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Ccl6P27784 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl6P27784 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl6P27784 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl6P27784 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Ccl6P27784 Gm37019-201ENSMUST00000192133 2134 ntBASIC10.33□□□□□ -0.76
Ccl6P27784 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.33□□□□□ -0.76
Ccl6P27784 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl6P27784 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl6P27784 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl6P27784 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl6P27784 Gm10327-201ENSMUST00000105222 1002 ntBASIC10.33□□□□□ -0.76
Ccl6P27784 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Ccl6P27784 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl6P27784 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Ccl6P27784 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl6P27784 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC10.33□□□□□ -0.76
Ccl6P27784 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl6P27784 Gm19078-201ENSMUST00000206311 727 ntBASIC10.33□□□□□ -0.76
Ccl6P27784 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl6P27784 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl6P27784 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl6P27784 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl6P27784 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Ccl6P27784 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl6P27784 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl6P27784 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl6P27784 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Ccl6P27784 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.33□□□□□ -0.76
Ccl6P27784 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl6P27784 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl6P27784 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Ccl6P27784 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl6P27784 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl6P27784 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl6P27784 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.32□□□□□ -0.76
Ccl6P27784 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl6P27784 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl6P27784 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl6P27784 Gm12500-202ENSMUST00000186471 2428 ntBASIC10.32□□□□□ -0.76
Ccl6P27784 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
Ccl6P27784 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.32□□□□□ -0.76
Ccl6P27784 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl6P27784 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl6P27784 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Ccl6P27784 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Ccl6P27784 Gm12537-201ENSMUST00000119266 1002 ntBASIC10.32□□□□□ -0.76
Ccl6P27784 Gm11524-201ENSMUST00000119349 807 ntBASIC10.32□□□□□ -0.76
Ccl6P27784 Gm12070-201ENSMUST00000119551 1002 ntBASIC10.32□□□□□ -0.76
Ccl6P27784 Gm12671-201ENSMUST00000119978 1002 ntBASIC10.32□□□□□ -0.76
Ccl6P27784 Gm13292-201ENSMUST00000120014 1000 ntBASIC10.32□□□□□ -0.76
Ccl6P27784 Gm12403-201ENSMUST00000121384 959 ntBASIC10.32□□□□□ -0.76
Ccl6P27784 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl6P27784 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.32□□□□□ -0.76
Ccl6P27784 Gm10359-201ENSMUST00000180167 1002 ntBASIC10.32□□□□□ -0.76
Ccl6P27784 Gm12033-201ENSMUST00000180654 1002 ntBASIC10.32□□□□□ -0.76
Ccl6P27784 Gm5559-201ENSMUST00000180755 1002 ntBASIC10.32□□□□□ -0.76
Ccl6P27784 Gm4335-201ENSMUST00000182581 1004 ntBASIC10.32□□□□□ -0.76
Ccl6P27784 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC10.32□□□□□ -0.76
Ccl6P27784 Gm27437-201ENSMUST00000183429 107 ntBASIC10.32□□□□□ -0.76
Ccl6P27784 Gm29608-201ENSMUST00000190444 463 ntBASIC10.32□□□□□ -0.76
Ccl6P27784 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Ccl6P27784 CT025535.1-201ENSMUST00000227172 491 ntBASIC10.32□□□□□ -0.76
Ccl6P27784 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms