Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40P27512 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40P27512 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40P27512 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40P27512 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40P27512 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40P27512 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40P27512 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40P27512 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cd40P27512 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40P27512 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cd40P27512 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cd40P27512 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.98□□□□□ -0.49
Cd40P27512 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.98□□□□□ -0.49
Cd40P27512 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cd40P27512 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cd40P27512 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cd40P27512 Gm11478-201ENSMUST00000117851 599 ntBASIC11.98□□□□□ -0.49
Cd40P27512 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.98□□□□□ -0.49
Cd40P27512 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.98□□□□□ -0.49
Cd40P27512 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.98□□□□□ -0.49
Cd40P27512 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.98□□□□□ -0.49
Cd40P27512 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Cd40P27512 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cd40P27512 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cd40P27512 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cd40P27512 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.98□□□□□ -0.49
Cd40P27512 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cd40P27512 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40P27512 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40P27512 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40P27512 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40P27512 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
Cd40P27512 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.97□□□□□ -0.49
Cd40P27512 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40P27512 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40P27512 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cd40P27512 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40P27512 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40P27512 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40P27512 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cd40P27512 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.97□□□□□ -0.49
Cd40P27512 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40P27512 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40P27512 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40P27512 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cd40P27512 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40P27512 Gm8213-201ENSMUST00000118191 441 ntBASIC11.97□□□□□ -0.49
Cd40P27512 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.97□□□□□ -0.49
Cd40P27512 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40P27512 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40P27512 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.97□□□□□ -0.49
Cd40P27512 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40P27512 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.97□□□□□ -0.49
Cd40P27512 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.97□□□□□ -0.49
Cd40P27512 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.97□□□□□ -0.49
Cd40P27512 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.97□□□□□ -0.49
Cd40P27512 Gm8598-201ENSMUST00000221184 836 ntBASIC11.97□□□□□ -0.49
Cd40P27512 Grk6-205ENSMUST00000224653 2976 ntBASIC11.97□□□□□ -0.49
Cd40P27512 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40P27512 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40P27512 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40P27512 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40P27512 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40P27512 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cd40P27512 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40P27512 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cd40P27512 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40P27512 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40P27512 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.97□□□□□ -0.49
Cd40P27512 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40P27512 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40P27512 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd40P27512 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms