Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxd8P23463 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.62□□□□□ -0.23
Hoxd8P23463 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxd8P23463 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxd8P23463 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxd8P23463 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxd8P23463 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxd8P23463 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.62□□□□□ -0.23
Hoxd8P23463 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxd8P23463 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxd8P23463 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxd8P23463 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.62□□□□□ -0.23
Hoxd8P23463 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxd8P23463 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxd8P23463 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxd8P23463 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxd8P23463 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxd8P23463 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxd8P23463 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxd8P23463 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Hoxd8P23463 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxd8P23463 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxd8P23463 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxd8P23463 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxd8P23463 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxd8P23463 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxd8P23463 Gm13492-201ENSMUST00000119772 665 ntBASIC13.61□□□□□ -0.23
Hoxd8P23463 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxd8P23463 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC13.61□□□□□ -0.23
Hoxd8P23463 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.61□□□□□ -0.23
Hoxd8P23463 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Hoxd8P23463 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxd8P23463 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Hoxd8P23463 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Hoxd8P23463 Gm24514-201ENSMUST00000174961 285 ntBASIC13.61□□□□□ -0.23
Hoxd8P23463 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.61□□□□□ -0.23
Hoxd8P23463 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxd8P23463 Gm30285-201ENSMUST00000214614 422 ntBASIC13.61□□□□□ -0.23
Hoxd8P23463 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Hoxd8P23463 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Hoxd8P23463 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Hoxd8P23463 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxd8P23463 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxd8P23463 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Hoxd8P23463 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxd8P23463 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxd8P23463 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxd8P23463 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxd8P23463 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Hoxd8P23463 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxd8P23463 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxd8P23463 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Hoxd8P23463 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Hoxd8P23463 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxd8P23463 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Hoxd8P23463 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxd8P23463 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxd8P23463 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxd8P23463 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxd8P23463 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxd8P23463 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.6□□□□□ -0.23
Hoxd8P23463 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxd8P23463 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.6□□□□□ -0.23
Hoxd8P23463 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxd8P23463 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxd8P23463 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxd8P23463 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxd8P23463 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxd8P23463 Gm14921-201ENSMUST00000118643 908 ntBASIC13.6□□□□□ -0.23
Hoxd8P23463 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.6□□□□□ -0.23
Hoxd8P23463 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxd8P23463 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxd8P23463 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.6□□□□□ -0.23
Hoxd8P23463 Mir7032-201ENSMUST00000185154 79 ntBASIC13.6□□□□□ -0.23
Hoxd8P23463 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxd8P23463 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxd8P23463 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.6□□□□□ -0.23
Hoxd8P23463 Gm5950-201ENSMUST00000213337 772 ntBASIC13.6□□□□□ -0.23
Hoxd8P23463 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.6□□□□□ -0.23
Hoxd8P23463 Gm29787-201ENSMUST00000222129 849 ntBASIC13.6□□□□□ -0.23
Hoxd8P23463 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Hoxd8P23463 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxd8P23463 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxd8P23463 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxd8P23463 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxd8P23463 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxd8P23463 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxd8P23463 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxd8P23463 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxd8P23463 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.6□□□□□ -0.23
Hoxd8P23463 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxd8P23463 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxd8P23463 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Hoxd8P23463 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.6□□□□□ -0.23
Hoxd8P23463 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Hoxd8P23463 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxd8P23463 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.59□□□□□ -0.23
Hoxd8P23463 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.59□□□□□ -0.23
Hoxd8P23463 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxd8P23463 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms