Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cntn1P12960 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cntn1P12960 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cntn1P12960 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.72□□□□□ -0.37
Cntn1P12960 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cntn1P12960 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cntn1P12960 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cntn1P12960 Gm6447-201ENSMUST00000118905 835 ntBASIC12.72□□□□□ -0.37
Cntn1P12960 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.72□□□□□ -0.37
Cntn1P12960 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cntn1P12960 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.72□□□□□ -0.37
Cntn1P12960 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cntn1P12960 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cntn1P12960 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.72□□□□□ -0.37
Cntn1P12960 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.72□□□□□ -0.37
Cntn1P12960 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cntn1P12960 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.72□□□□□ -0.37
Cntn1P12960 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cntn1P12960 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cntn1P12960 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cntn1P12960 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cntn1P12960 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cntn1P12960 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cntn1P12960 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cntn1P12960 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cntn1P12960 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cntn1P12960 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.72□□□□□ -0.37
Cntn1P12960 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cntn1P12960 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cntn1P12960 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cntn1P12960 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cntn1P12960 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cntn1P12960 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cntn1P12960 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.71□□□□□ -0.37
Cntn1P12960 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cntn1P12960 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cntn1P12960 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cntn1P12960 Gm13369-201ENSMUST00000119442 987 ntBASIC12.71□□□□□ -0.37
Cntn1P12960 Gm16177-201ENSMUST00000120728 718 ntBASIC12.71□□□□□ -0.37
Cntn1P12960 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cntn1P12960 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.71□□□□□ -0.37
Cntn1P12960 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.71□□□□□ -0.37
Cntn1P12960 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.71□□□□□ -0.37
Cntn1P12960 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.71□□□□□ -0.37
Cntn1P12960 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cntn1P12960 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cntn1P12960 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cntn1P12960 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cntn1P12960 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cntn1P12960 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cntn1P12960 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Cntn1P12960 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
Cntn1P12960 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.71□□□□□ -0.38
Cntn1P12960 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cntn1P12960 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cntn1P12960 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cntn1P12960 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cntn1P12960 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cntn1P12960 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cntn1P12960 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cntn1P12960 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cntn1P12960 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cntn1P12960 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cntn1P12960 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cntn1P12960 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cntn1P12960 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cntn1P12960 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cntn1P12960 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cntn1P12960 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.7□□□□□ -0.38
Cntn1P12960 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cntn1P12960 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cntn1P12960 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.7□□□□□ -0.38
Cntn1P12960 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.7□□□□□ -0.38
Cntn1P12960 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cntn1P12960 Gm12742-201ENSMUST00000117326 410 ntBASIC12.7□□□□□ -0.38
Cntn1P12960 Gm12957-201ENSMUST00000117835 377 ntBASIC12.7□□□□□ -0.38
Cntn1P12960 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.7□□□□□ -0.38
Cntn1P12960 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cntn1P12960 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cntn1P12960 Gm43818-201ENSMUST00000200605 466 ntBASIC12.7□□□□□ -0.38
Cntn1P12960 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.7□□□□□ -0.38
Cntn1P12960 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cntn1P12960 Gm16372-201ENSMUST00000073088 450 ntBASIC12.7□□□□□ -0.38
Cntn1P12960 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cntn1P12960 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cntn1P12960 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cntn1P12960 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cntn1P12960 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cntn1P12960 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Cntn1P12960 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cntn1P12960 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cntn1P12960 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cntn1P12960 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cntn1P12960 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cntn1P12960 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cntn1P12960 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cntn1P12960 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cntn1P12960 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn1P12960 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn1P12960 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms