Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.64□□□□□ -0.39
Lire1P11260 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.64□□□□□ -0.39
Lire1P11260 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lire1P11260 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lire1P11260 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lire1P11260 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lire1P11260 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lire1P11260 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Lire1P11260 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Lire1P11260 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.64□□□□□ -0.39
Lire1P11260 Gm6745-201ENSMUST00000199216 526 ntBASIC12.64□□□□□ -0.39
Lire1P11260 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.64□□□□□ -0.39
Lire1P11260 Gm45668-201ENSMUST00000211271 493 ntBASIC12.64□□□□□ -0.39
Lire1P11260 Gm9229-201ENSMUST00000222777 126 ntBASIC12.64□□□□□ -0.39
Lire1P11260 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lire1P11260 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lire1P11260 Gm6180-201ENSMUST00000065243 498 ntBASIC12.64□□□□□ -0.39
Lire1P11260 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lire1P11260 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Lire1P11260 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lire1P11260 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lire1P11260 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lire1P11260 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lire1P11260 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lire1P11260 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Lire1P11260 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lire1P11260 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.64□□□□□ -0.39
Lire1P11260 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.64□□□□□ -0.39
Lire1P11260 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.63□□□□□ -0.39
Lire1P11260 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.63□□□□□ -0.39
Lire1P11260 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.63□□□□□ -0.39
Lire1P11260 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Lire1P11260 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Lire1P11260 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Lire1P11260 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Lire1P11260 Gm27631-201ENSMUST00000184163 466 ntBASIC12.63□□□□□ -0.39
Lire1P11260 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.63□□□□□ -0.39
Lire1P11260 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.63□□□□□ -0.39
Lire1P11260 Gm45453-201ENSMUST00000211758 853 ntBASIC12.63□□□□□ -0.39
Lire1P11260 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.63□□□□□ -0.39
Lire1P11260 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Lire1P11260 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Lire1P11260 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.63□□□□□ -0.39
Lire1P11260 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Lire1P11260 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lire1P11260 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lire1P11260 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.62□□□□□ -0.39
Lire1P11260 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lire1P11260 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lire1P11260 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lire1P11260 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lire1P11260 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lire1P11260 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Lire1P11260 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lire1P11260 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lire1P11260 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lire1P11260 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lire1P11260 Gm14042-201ENSMUST00000120139 833 ntBASIC12.62□□□□□ -0.39
Lire1P11260 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.62□□□□□ -0.39
Lire1P11260 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lire1P11260 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.62□□□□□ -0.39
Lire1P11260 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.62□□□□□ -0.39
Lire1P11260 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.62□□□□□ -0.39
Lire1P11260 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Lire1P11260 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lire1P11260 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lire1P11260 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lire1P11260 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lire1P11260 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lire1P11260 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lire1P11260 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lire1P11260 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lire1P11260 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lire1P11260 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms