Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Il17rd-203ENSMUST00000225146 3366 ntBASIC17.05■□□□□ 0.32
Hoxc9P09633 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc9P09633 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Hoxc9P09633 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc9P09633 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc9P09633 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc9P09633 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc9P09633 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC17.05■□□□□ 0.32
Hoxc9P09633 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hoxc9P09633 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc9P09633 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Hoxc9P09633 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc9P09633 AA914427-201ENSMUST00000193194 1166 ntBASIC17.05■□□□□ 0.32
Hoxc9P09633 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc9P09633 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc9P09633 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc9P09633 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc9P09633 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc9P09633 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hoxc9P09633 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc9P09633 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc9P09633 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc9P09633 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Hoxc9P09633 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc9P09633 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC17.05■□□□□ 0.32
Hoxc9P09633 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc9P09633 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Hoxc9P09633 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc9P09633 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc9P09633 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC17.04■□□□□ 0.32
Hoxc9P09633 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc9P09633 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Hoxc9P09633 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc9P09633 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc9P09633 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc9P09633 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc9P09633 Gm3287-205ENSMUST00000228893 1332 ntBASIC17.04■□□□□ 0.32
Hoxc9P09633 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc9P09633 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc9P09633 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc9P09633 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc9P09633 Gm8908-201ENSMUST00000121633 1024 ntBASIC17.04■□□□□ 0.32
Hoxc9P09633 Gm14017-201ENSMUST00000121934 386 ntBASIC17.04■□□□□ 0.32
Hoxc9P09633 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc9P09633 Gm24990-201ENSMUST00000157406 323 ntBASIC17.04■□□□□ 0.32
Hoxc9P09633 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc9P09633 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc9P09633 Rps4l-202ENSMUST00000204242 789 ntBASIC17.04■□□□□ 0.32
Hoxc9P09633 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC17.04■□□□□ 0.32
Hoxc9P09633 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Hoxc9P09633 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC17.04■□□□□ 0.32
Hoxc9P09633 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc9P09633 AC154595.3-201ENSMUST00000224579 384 ntBASIC17.04■□□□□ 0.32
Hoxc9P09633 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc9P09633 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc9P09633 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc9P09633 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc9P09633 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc9P09633 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc9P09633 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc9P09633 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc9P09633 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc9P09633 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.04■□□□□ 0.32
Hoxc9P09633 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxc9P09633 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC17.04■□□□□ 0.32
Hoxc9P09633 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC17.03■□□□□ 0.32
Hoxc9P09633 Gm43134-201ENSMUST00000199434 1886 ntBASIC17.03■□□□□ 0.32
Hoxc9P09633 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc9P09633 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Hoxc9P09633 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc9P09633 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc9P09633 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc9P09633 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc9P09633 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc9P09633 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc9P09633 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc9P09633 Gm13570-201ENSMUST00000140763 309 ntBASIC17.03■□□□□ 0.32
Hoxc9P09633 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc9P09633 Gm23363-201ENSMUST00000175024 79 ntBASIC17.03■□□□□ 0.32
Hoxc9P09633 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC17.03■□□□□ 0.32
Hoxc9P09633 Gm8885-201ENSMUST00000189382 598 ntBASIC17.03■□□□□ 0.32
Hoxc9P09633 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC17.03■□□□□ 0.32
Hoxc9P09633 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc9P09633 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc9P09633 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc9P09633 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc9P09633 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Hoxc9P09633 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc9P09633 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxc9P09633 Gm7789-202ENSMUST00000211273 1400 ntBASIC17.03■□□□□ 0.32
Hoxc9P09633 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Hoxc9P09633 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc9P09633 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc9P09633 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc9P09633 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc9P09633 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc9P09633 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc9P09633 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc9P09633 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Hoxc9P09633 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms