Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
ApoeP08226 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.53□□□□□ -0.4
ApoeP08226 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
ApoeP08226 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ApoeP08226 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ApoeP08226 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ApoeP08226 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
ApoeP08226 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ApoeP08226 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ApoeP08226 Gm22065-201ENSMUST00000103753 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm22066-201ENSMUST00000103761 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm24932-201ENSMUST00000103763 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm24115-201ENSMUST00000103799 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm22190-201ENSMUST00000103827 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm22191-201ENSMUST00000103831 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm24721-201ENSMUST00000103849 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm28018-201ENSMUST00000103869 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm26399-201ENSMUST00000103937 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ApoeP08226 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ApoeP08226 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ApoeP08226 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.53□□□□□ -0.4
ApoeP08226 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.53□□□□□ -0.4
ApoeP08226 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ApoeP08226 Gm25349-201ENSMUST00000177728 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm23616-201ENSMUST00000177797 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm25871-201ENSMUST00000177816 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm24752-201ENSMUST00000178240 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm24496-201ENSMUST00000178287 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm25649-201ENSMUST00000178476 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm25548-201ENSMUST00000178681 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm23147-201ENSMUST00000178841 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ApoeP08226 Gm26095-201ENSMUST00000179270 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm22171-201ENSMUST00000179283 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm23936-201ENSMUST00000179354 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm22619-201ENSMUST00000179516 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm25255-201ENSMUST00000179579 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm24755-201ENSMUST00000179691 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm26506-201ENSMUST00000179692 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm25086-201ENSMUST00000179931 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm23243-201ENSMUST00000180047 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm24659-201ENSMUST00000180212 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm24169-201ENSMUST00000180244 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm23689-201ENSMUST00000180354 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm27359-201ENSMUST00000184153 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm27785-201ENSMUST00000184268 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm27466-201ENSMUST00000184396 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Gm27703-201ENSMUST00000184836 110 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.53□□□□□ -0.4
ApoeP08226 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.53□□□□□ -0.4
ApoeP08226 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.53□□□□□ -0.4
ApoeP08226 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ApoeP08226 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
ApoeP08226 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
ApoeP08226 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
ApoeP08226 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
ApoeP08226 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ApoeP08226 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ApoeP08226 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.53□□□□□ -0.4
ApoeP08226 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
ApoeP08226 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ApoeP08226 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
ApoeP08226 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ApoeP08226 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ApoeP08226 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ApoeP08226 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
ApoeP08226 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.52□□□□□ -0.4
ApoeP08226 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
ApoeP08226 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ApoeP08226 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ApoeP08226 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
ApoeP08226 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.52□□□□□ -0.4
ApoeP08226 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ApoeP08226 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ApoeP08226 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ApoeP08226 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
ApoeP08226 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ApoeP08226 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.52□□□□□ -0.4
ApoeP08226 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
ApoeP08226 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
ApoeP08226 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ApoeP08226 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ApoeP08226 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ApoeP08226 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.52□□□□□ -0.41
ApoeP08226 Gm15467-201ENSMUST00000120582 445 ntBASIC12.52□□□□□ -0.41
ApoeP08226 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ApoeP08226 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.52□□□□□ -0.41
ApoeP08226 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ApoeP08226 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.52□□□□□ -0.41
ApoeP08226 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ApoeP08226 Gm17330-201ENSMUST00000221047 165 ntBASIC12.52□□□□□ -0.41
ApoeP08226 Shd-206ENSMUST00000225145 998 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms