Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Hoxa4P06798 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Hoxa4P06798 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.03□□□□□ -0.32
Hoxa4P06798 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.03□□□□□ -0.32
Hoxa4P06798 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa4P06798 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa4P06798 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa4P06798 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa4P06798 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa4P06798 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa4P06798 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa4P06798 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa4P06798 Gm12384-201ENSMUST00000119228 919 ntBASIC13.03□□□□□ -0.32
Hoxa4P06798 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa4P06798 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.03□□□□□ -0.32
Hoxa4P06798 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.03□□□□□ -0.32
Hoxa4P06798 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.03□□□□□ -0.32
Hoxa4P06798 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.03□□□□□ -0.32
Hoxa4P06798 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Hoxa4P06798 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa4P06798 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.03□□□□□ -0.32
Hoxa4P06798 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.03□□□□□ -0.32
Hoxa4P06798 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa4P06798 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Hoxa4P06798 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa4P06798 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Hoxa4P06798 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa4P06798 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa4P06798 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Hoxa4P06798 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.03□□□□□ -0.32
Hoxa4P06798 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa4P06798 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa4P06798 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxa4P06798 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Hoxa4P06798 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Hoxa4P06798 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.03□□□□□ -0.32
Hoxa4P06798 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.03□□□□□ -0.32
Hoxa4P06798 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.03□□□□□ -0.32
Hoxa4P06798 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.02□□□□□ -0.32
Hoxa4P06798 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa4P06798 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa4P06798 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.02□□□□□ -0.32
Hoxa4P06798 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.02□□□□□ -0.32
Hoxa4P06798 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa4P06798 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa4P06798 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Hoxa4P06798 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxa4P06798 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Hoxa4P06798 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa4P06798 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa4P06798 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa4P06798 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa4P06798 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa4P06798 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Hoxa4P06798 Gm13369-201ENSMUST00000119442 987 ntBASIC13.02□□□□□ -0.33
Hoxa4P06798 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.02□□□□□ -0.33
Hoxa4P06798 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa4P06798 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.02□□□□□ -0.33
Hoxa4P06798 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.02□□□□□ -0.33
Hoxa4P06798 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.02□□□□□ -0.33
Hoxa4P06798 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Hoxa4P06798 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa4P06798 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Hoxa4P06798 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.02□□□□□ -0.33
Hoxa4P06798 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa4P06798 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa4P06798 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa4P06798 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Hoxa4P06798 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa4P06798 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Hoxa4P06798 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
Hoxa4P06798 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Hoxa4P06798 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa4P06798 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa4P06798 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa4P06798 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.02□□□□□ -0.33
Hoxa4P06798 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa4P06798 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.02□□□□□ -0.33
Hoxa4P06798 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa4P06798 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa4P06798 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa4P06798 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa4P06798 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.01□□□□□ -0.33
Hoxa4P06798 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.01□□□□□ -0.33
Hoxa4P06798 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Hoxa4P06798 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa4P06798 Mir686-201ENSMUST00000102174 109 ntBASIC13.01□□□□□ -0.33
Hoxa4P06798 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
Hoxa4P06798 Gm13226-201ENSMUST00000117838 404 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms