Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.13□□□□□ -0.63
Hoxa3P02831 Gm15770-201ENSMUST00000117498 584 ntBASIC11.13□□□□□ -0.63
Hoxa3P02831 Gm13226-201ENSMUST00000117838 404 ntBASIC11.13□□□□□ -0.63
Hoxa3P02831 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.13□□□□□ -0.63
Hoxa3P02831 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Gm27847-201ENSMUST00000183711 107 ntBASIC11.13□□□□□ -0.63
Hoxa3P02831 Gm27375-201ENSMUST00000183799 107 ntBASIC11.13□□□□□ -0.63
Hoxa3P02831 Gm29127-201ENSMUST00000188304 517 ntBASIC11.13□□□□□ -0.63
Hoxa3P02831 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.13□□□□□ -0.63
Hoxa3P02831 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.13□□□□□ -0.63
Hoxa3P02831 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.13□□□□□ -0.63
Hoxa3P02831 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.13□□□□□ -0.63
Hoxa3P02831 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.13□□□□□ -0.63
Hoxa3P02831 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Hoxa3P02831 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.13□□□□□ -0.63
Hoxa3P02831 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.13□□□□□ -0.63
Hoxa3P02831 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.13□□□□□ -0.63
Hoxa3P02831 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Hoxa3P02831 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.13□□□□□ -0.63
Hoxa3P02831 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.13□□□□□ -0.63
Hoxa3P02831 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa3P02831 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa3P02831 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa3P02831 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.12□□□□□ -0.63
Hoxa3P02831 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.12□□□□□ -0.63
Hoxa3P02831 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa3P02831 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa3P02831 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa3P02831 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa3P02831 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.12□□□□□ -0.63
Hoxa3P02831 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa3P02831 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa3P02831 Grk6-205ENSMUST00000224653 2976 ntBASIC11.12□□□□□ -0.63
Hoxa3P02831 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa3P02831 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa3P02831 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Hoxa3P02831 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa3P02831 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa3P02831 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Hoxa3P02831 Gm11803-201ENSMUST00000119966 444 ntBASIC11.12□□□□□ -0.63
Hoxa3P02831 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.12□□□□□ -0.63
Hoxa3P02831 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.12□□□□□ -0.63
Hoxa3P02831 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa3P02831 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa3P02831 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.12□□□□□ -0.63
Hoxa3P02831 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.12□□□□□ -0.63
Hoxa3P02831 Gm18473-201ENSMUST00000220543 868 ntBASIC11.12□□□□□ -0.63
Hoxa3P02831 Gm17330-201ENSMUST00000221047 165 ntBASIC11.12□□□□□ -0.63
Hoxa3P02831 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa3P02831 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa3P02831 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa3P02831 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa3P02831 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa3P02831 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Hoxa3P02831 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa3P02831 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa3P02831 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Hoxa3P02831 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Hoxa3P02831 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa3P02831 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.12□□□□□ -0.63
Hoxa3P02831 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Hoxa3P02831 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa3P02831 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa3P02831 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa3P02831 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.12□□□□□ -0.63
Hoxa3P02831 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa3P02831 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa3P02831 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa3P02831 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.11□□□□□ -0.63
Hoxa3P02831 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa3P02831 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa3P02831 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa3P02831 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa3P02831 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa3P02831 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms