Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopeO89079 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
CopeO89079 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CopeO89079 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopeO89079 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CopeO89079 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopeO89079 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopeO89079 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CopeO89079 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.67□□□□□ -0.22
CopeO89079 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopeO89079 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopeO89079 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopeO89079 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopeO89079 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
CopeO89079 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.67□□□□□ -0.22
CopeO89079 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
CopeO89079 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CopeO89079 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.67□□□□□ -0.22
CopeO89079 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CopeO89079 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.67□□□□□ -0.22
CopeO89079 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.67□□□□□ -0.22
CopeO89079 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CopeO89079 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.67□□□□□ -0.22
CopeO89079 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopeO89079 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopeO89079 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CopeO89079 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
CopeO89079 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopeO89079 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopeO89079 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CopeO89079 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.67□□□□□ -0.22
CopeO89079 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CopeO89079 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopeO89079 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopeO89079 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CopeO89079 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopeO89079 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopeO89079 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CopeO89079 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CopeO89079 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.66□□□□□ -0.22
CopeO89079 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CopeO89079 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.66□□□□□ -0.22
CopeO89079 Gm25948-201ENSMUST00000175334 112 ntBASIC13.66□□□□□ -0.22
CopeO89079 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CopeO89079 Gm44344-201ENSMUST00000200287 129 ntBASIC13.66□□□□□ -0.22
CopeO89079 Gm43703-201ENSMUST00000200523 763 ntBASIC13.66□□□□□ -0.22
CopeO89079 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
CopeO89079 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CopeO89079 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
CopeO89079 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopeO89079 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CopeO89079 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopeO89079 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.65□□□□□ -0.22
CopeO89079 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopeO89079 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CopeO89079 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.65□□□□□ -0.22
CopeO89079 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopeO89079 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopeO89079 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.65□□□□□ -0.22
CopeO89079 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CopeO89079 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopeO89079 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CopeO89079 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CopeO89079 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.65□□□□□ -0.22
CopeO89079 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.65□□□□□ -0.22
CopeO89079 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.65□□□□□ -0.22
CopeO89079 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.65□□□□□ -0.22
CopeO89079 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.65□□□□□ -0.22
CopeO89079 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CopeO89079 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CopeO89079 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.65□□□□□ -0.22
CopeO89079 Chchd1-203ENSMUST00000224633 557 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms