Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Gm21722-201ENSMUST00000190153 696 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Gm28423-201ENSMUST00000190701 696 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Gm21899-201ENSMUST00000190745 696 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Gm21910-201ENSMUST00000191163 696 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Gm21849-201ENSMUST00000191571 696 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Gm28678-201ENSMUST00000191593 696 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Pde6dO55057 Gm20910-201ENSMUST00000193268 696 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Gm21871-201ENSMUST00000194621 696 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC10.45□□□□□ -0.74
Pde6dO55057 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Pde6dO55057 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.45□□□□□ -0.74
Pde6dO55057 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Pde6dO55057 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.45□□□□□ -0.74
Pde6dO55057 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Pde6dO55057 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Pde6dO55057 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.44□□□□□ -0.74
Pde6dO55057 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.44□□□□□ -0.74
Pde6dO55057 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Pde6dO55057 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Pde6dO55057 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.44□□□□□ -0.74
Pde6dO55057 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.44□□□□□ -0.74
Pde6dO55057 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.44□□□□□ -0.74
Pde6dO55057 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.44□□□□□ -0.74
Pde6dO55057 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Pde6dO55057 Gm13036-201ENSMUST00000117799 748 ntBASIC10.44□□□□□ -0.74
Pde6dO55057 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC10.44□□□□□ -0.74
Pde6dO55057 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 Gm4971-201ENSMUST00000205991 1108 ntBASIC10.44□□□□□ -0.74
Pde6dO55057 Gm45841-201ENSMUST00000207700 164 ntBASIC10.44□□□□□ -0.74
Pde6dO55057 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC10.44□□□□□ -0.74
Pde6dO55057 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.44□□□□□ -0.74
Pde6dO55057 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC10.44□□□□□ -0.74
Pde6dO55057 CT025555.1-201ENSMUST00000225901 1217 ntBASIC10.44□□□□□ -0.74
Pde6dO55057 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Pde6dO55057 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Pde6dO55057 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Pde6dO55057 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Pde6dO55057 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Pde6dO55057 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Pde6dO55057 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.44□□□□□ -0.74
Pde6dO55057 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pde6dO55057 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.44□□□□□ -0.74
Pde6dO55057 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Pde6dO55057 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Pde6dO55057 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC10.43□□□□□ -0.74
Pde6dO55057 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.43□□□□□ -0.74
Pde6dO55057 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Pde6dO55057 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Pde6dO55057 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Pde6dO55057 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms