Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.32□□□□□ -0.44
BckdkO55028 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
BckdkO55028 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BckdkO55028 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
BckdkO55028 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
BckdkO55028 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BckdkO55028 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BckdkO55028 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
BckdkO55028 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
BckdkO55028 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
BckdkO55028 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.31□□□□□ -0.44
BckdkO55028 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
BckdkO55028 Mir1894-201ENSMUST00000122802 81 ntBASIC12.31□□□□□ -0.44
BckdkO55028 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 Gm29741-201ENSMUST00000192667 421 ntBASIC12.31□□□□□ -0.44
BckdkO55028 Gm6266-201ENSMUST00000203844 806 ntBASIC12.31□□□□□ -0.44
BckdkO55028 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.31□□□□□ -0.44
BckdkO55028 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.31□□□□□ -0.44
BckdkO55028 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
BckdkO55028 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.31□□□□□ -0.44
BckdkO55028 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BckdkO55028 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
BckdkO55028 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.3□□□□□ -0.44
BckdkO55028 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.3□□□□□ -0.44
BckdkO55028 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.3□□□□□ -0.44
BckdkO55028 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
BckdkO55028 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.3□□□□□ -0.44
BckdkO55028 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 Mir698-201ENSMUST00000102164 109 ntBASIC12.3□□□□□ -0.44
BckdkO55028 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.3□□□□□ -0.44
BckdkO55028 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.3□□□□□ -0.44
BckdkO55028 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.3□□□□□ -0.44
BckdkO55028 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
BckdkO55028 Gm44719-201ENSMUST00000206404 149 ntBASIC12.3□□□□□ -0.44
BckdkO55028 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
BckdkO55028 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.3□□□□□ -0.44
BckdkO55028 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
BckdkO55028 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.3□□□□□ -0.44
BckdkO55028 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.3□□□□□ -0.44
BckdkO55028 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.3□□□□□ -0.44
BckdkO55028 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BckdkO55028 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
BckdkO55028 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BckdkO55028 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
BckdkO55028 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.29□□□□□ -0.44
BckdkO55028 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BckdkO55028 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BckdkO55028 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
BckdkO55028 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
BckdkO55028 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms