Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Itgb3O54890 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Itgb3O54890 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Itgb3O54890 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.04□□□□□ -0.16
Itgb3O54890 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Itgb3O54890 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Itgb3O54890 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Itgb3O54890 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.04□□□□□ -0.16
Itgb3O54890 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Itgb3O54890 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.04□□□□□ -0.16
Itgb3O54890 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.04□□□□□ -0.16
Itgb3O54890 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Itgb3O54890 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Itgb3O54890 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Itgb3O54890 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Itgb3O54890 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Itgb3O54890 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Itgb3O54890 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Itgb3O54890 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Itgb3O54890 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Itgb3O54890 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Itgb3O54890 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Itgb3O54890 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.04□□□□□ -0.16
Itgb3O54890 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Itgb3O54890 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.03□□□□□ -0.16
Itgb3O54890 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.03□□□□□ -0.16
Itgb3O54890 Gm8805-201ENSMUST00000117848 313 ntBASIC14.03□□□□□ -0.16
Itgb3O54890 Gm12384-201ENSMUST00000119228 919 ntBASIC14.03□□□□□ -0.16
Itgb3O54890 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Itgb3O54890 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.03□□□□□ -0.16
Itgb3O54890 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
Itgb3O54890 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Gm43438-201ENSMUST00000198133 379 ntBASIC14.03□□□□□ -0.16
Itgb3O54890 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.03□□□□□ -0.16
Itgb3O54890 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Itgb3O54890 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Itgb3O54890 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.03□□□□□ -0.16
Itgb3O54890 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.03□□□□□ -0.16
Itgb3O54890 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.03□□□□□ -0.16
Itgb3O54890 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Itgb3O54890 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Itgb3O54890 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Itgb3O54890 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Itgb3O54890 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Itgb3O54890 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Itgb3O54890 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Itgb3O54890 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Itgb3O54890 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Itgb3O54890 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.02□□□□□ -0.16
Itgb3O54890 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Itgb3O54890 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.02□□□□□ -0.16
Itgb3O54890 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Itgb3O54890 Gm12957-201ENSMUST00000117835 377 ntBASIC14.02□□□□□ -0.17
Itgb3O54890 Gm1335-201ENSMUST00000121653 386 ntBASIC14.02□□□□□ -0.17
Itgb3O54890 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.02□□□□□ -0.17
Itgb3O54890 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.02□□□□□ -0.17
Itgb3O54890 Snora78-201ENSMUST00000158630 128 ntBASIC14.02□□□□□ -0.17
Itgb3O54890 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.02□□□□□ -0.17
Itgb3O54890 Gm27682-201ENSMUST00000183930 110 ntBASIC14.02□□□□□ -0.17
Itgb3O54890 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.02□□□□□ -0.17
Itgb3O54890 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Itgb3O54890 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Itgb3O54890 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Itgb3O54890 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Itgb3O54890 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Itgb3O54890 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Itgb3O54890 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Itgb3O54890 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms