Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgb3O54879 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgb3O54879 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgb3O54879 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.95□□□□□ -0.66
Hmgb3O54879 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgb3O54879 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgb3O54879 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Hmgb3O54879 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgb3O54879 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgb3O54879 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgb3O54879 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgb3O54879 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgb3O54879 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgb3O54879 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgb3O54879 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgb3O54879 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.94□□□□□ -0.66
Hmgb3O54879 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgb3O54879 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgb3O54879 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgb3O54879 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgb3O54879 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgb3O54879 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Hmgb3O54879 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.94□□□□□ -0.66
Hmgb3O54879 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgb3O54879 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgb3O54879 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Hmgb3O54879 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgb3O54879 Gm13823-201ENSMUST00000119930 345 ntBASIC10.94□□□□□ -0.66
Hmgb3O54879 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC10.94□□□□□ -0.66
Hmgb3O54879 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC10.94□□□□□ -0.66
Hmgb3O54879 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Hmgb3O54879 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgb3O54879 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgb3O54879 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgb3O54879 AC090659.1-201ENSMUST00000224334 768 ntBASIC10.94□□□□□ -0.66
Hmgb3O54879 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgb3O54879 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgb3O54879 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgb3O54879 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgb3O54879 Matn2-203ENSMUST00000226766 3252 ntBASIC10.94□□□□□ -0.66
Hmgb3O54879 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgb3O54879 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Hmgb3O54879 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgb3O54879 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgb3O54879 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgb3O54879 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Hmgb3O54879 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgb3O54879 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmgb3O54879 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmgb3O54879 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmgb3O54879 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC10.93□□□□□ -0.66
Hmgb3O54879 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Hmgb3O54879 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmgb3O54879 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.93□□□□□ -0.66
Hmgb3O54879 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Hmgb3O54879 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hmgb3O54879 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmgb3O54879 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hmgb3O54879 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmgb3O54879 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmgb3O54879 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmgb3O54879 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Hmgb3O54879 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.93□□□□□ -0.66
Hmgb3O54879 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmgb3O54879 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
Hmgb3O54879 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmgb3O54879 Paupar-201ENSMUST00000194826 3482 ntBASIC10.93□□□□□ -0.66
Hmgb3O54879 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmgb3O54879 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC10.93□□□□□ -0.66
Hmgb3O54879 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmgb3O54879 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Hmgb3O54879 Gm29310-201ENSMUST00000185468 696 ntBASIC10.93□□□□□ -0.66
Hmgb3O54879 Gm21825-201ENSMUST00000185728 696 ntBASIC10.93□□□□□ -0.66
Hmgb3O54879 Gm29109-201ENSMUST00000185895 696 ntBASIC10.93□□□□□ -0.66
Hmgb3O54879 Gm21896-201ENSMUST00000186520 696 ntBASIC10.93□□□□□ -0.66
Hmgb3O54879 Gm21873-201ENSMUST00000186728 696 ntBASIC10.93□□□□□ -0.66
Hmgb3O54879 Gm21794-201ENSMUST00000187056 696 ntBASIC10.93□□□□□ -0.66
Hmgb3O54879 Gm21880-201ENSMUST00000187275 696 ntBASIC10.93□□□□□ -0.66
Hmgb3O54879 Gm21826-201ENSMUST00000187451 696 ntBASIC10.93□□□□□ -0.66
Hmgb3O54879 Gm21198-201ENSMUST00000188393 696 ntBASIC10.93□□□□□ -0.66
Hmgb3O54879 Gm21749-201ENSMUST00000189343 696 ntBASIC10.93□□□□□ -0.66
Hmgb3O54879 Gm21901-201ENSMUST00000189568 696 ntBASIC10.93□□□□□ -0.66
Hmgb3O54879 Gm29424-201ENSMUST00000189716 696 ntBASIC10.93□□□□□ -0.66
Hmgb3O54879 Gm28599-201ENSMUST00000189838 694 ntBASIC10.93□□□□□ -0.66
Hmgb3O54879 Gm21867-201ENSMUST00000189917 696 ntBASIC10.93□□□□□ -0.66
Hmgb3O54879 Gm29269-201ENSMUST00000190087 696 ntBASIC10.93□□□□□ -0.66
Hmgb3O54879 Gm21722-201ENSMUST00000190153 696 ntBASIC10.93□□□□□ -0.66
Hmgb3O54879 Gm28423-201ENSMUST00000190701 696 ntBASIC10.93□□□□□ -0.66
Hmgb3O54879 Gm21899-201ENSMUST00000190745 696 ntBASIC10.93□□□□□ -0.66
Hmgb3O54879 Gm21910-201ENSMUST00000191163 696 ntBASIC10.93□□□□□ -0.66
Hmgb3O54879 Gm21849-201ENSMUST00000191571 696 ntBASIC10.93□□□□□ -0.66
Hmgb3O54879 Gm28678-201ENSMUST00000191593 696 ntBASIC10.93□□□□□ -0.66
Hmgb3O54879 Gm20910-201ENSMUST00000193268 696 ntBASIC10.93□□□□□ -0.66
Hmgb3O54879 Gm21871-201ENSMUST00000194621 696 ntBASIC10.93□□□□□ -0.66
Hmgb3O54879 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Hmgb3O54879 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC10.93□□□□□ -0.66
Hmgb3O54879 AC154222.1-201ENSMUST00000223882 475 ntBASIC10.93□□□□□ -0.66
Hmgb3O54879 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmgb3O54879 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Hmgb3O54879 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 229.1 ms