Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.41□□□□□ -0.26
ChkaO54804 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ChkaO54804 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ChkaO54804 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ChkaO54804 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ChkaO54804 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ChkaO54804 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ChkaO54804 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ChkaO54804 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
ChkaO54804 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ChkaO54804 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ChkaO54804 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ChkaO54804 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
ChkaO54804 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.4□□□□□ -0.26
ChkaO54804 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.4□□□□□ -0.26
ChkaO54804 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ChkaO54804 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ChkaO54804 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.4□□□□□ -0.26
ChkaO54804 Mir8102-201ENSMUST00000184148 139 ntBASIC13.4□□□□□ -0.26
ChkaO54804 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.4□□□□□ -0.26
ChkaO54804 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.4□□□□□ -0.26
ChkaO54804 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ChkaO54804 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ChkaO54804 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.4□□□□□ -0.26
ChkaO54804 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ChkaO54804 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.4□□□□□ -0.26
ChkaO54804 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ChkaO54804 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ChkaO54804 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ChkaO54804 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ChkaO54804 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ChkaO54804 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ChkaO54804 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ChkaO54804 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ChkaO54804 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.4□□□□□ -0.26
ChkaO54804 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ChkaO54804 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ChkaO54804 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ChkaO54804 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ChkaO54804 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ChkaO54804 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ChkaO54804 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ChkaO54804 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ChkaO54804 Gm22189-201ENSMUST00000103822 86 ntBASIC13.39□□□□□ -0.27
ChkaO54804 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ChkaO54804 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ChkaO54804 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.39□□□□□ -0.27
ChkaO54804 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
ChkaO54804 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.39□□□□□ -0.27
ChkaO54804 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.39□□□□□ -0.27
ChkaO54804 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ChkaO54804 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.39□□□□□ -0.27
ChkaO54804 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.39□□□□□ -0.27
ChkaO54804 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
ChkaO54804 Gm28760-201ENSMUST00000185995 736 ntBASIC13.39□□□□□ -0.27
ChkaO54804 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.39□□□□□ -0.27
ChkaO54804 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.39□□□□□ -0.27
ChkaO54804 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.39□□□□□ -0.27
ChkaO54804 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.39□□□□□ -0.27
ChkaO54804 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.39□□□□□ -0.27
ChkaO54804 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.39□□□□□ -0.27
ChkaO54804 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.39□□□□□ -0.27
ChkaO54804 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ChkaO54804 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ChkaO54804 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ChkaO54804 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ChkaO54804 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
ChkaO54804 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ChkaO54804 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ChkaO54804 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
ChkaO54804 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.39□□□□□ -0.27
ChkaO54804 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ChkaO54804 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.39□□□□□ -0.27
ChkaO54804 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ChkaO54804 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ChkaO54804 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ChkaO54804 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
ChkaO54804 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ChkaO54804 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.39□□□□□ -0.27
ChkaO54804 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ChkaO54804 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ChkaO54804 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ChkaO54804 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ChkaO54804 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ChkaO54804 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ChkaO54804 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ChkaO54804 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ChkaO54804 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ChkaO54804 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ChkaO54804 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ChkaO54804 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ChkaO54804 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ChkaO54804 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ChkaO54804 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.38□□□□□ -0.27
ChkaO54804 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
ChkaO54804 Gm38144-201ENSMUST00000192790 465 ntBASIC13.38□□□□□ -0.27
ChkaO54804 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ChkaO54804 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.38□□□□□ -0.27
ChkaO54804 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ChkaO54804 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms