Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Limk2O54785 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Limk2O54785 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Limk2O54785 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Limk2O54785 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Limk2O54785 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Limk2O54785 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
Limk2O54785 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Limk2O54785 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Limk2O54785 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Limk2O54785 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Limk2O54785 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Limk2O54785 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Limk2O54785 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Limk2O54785 Grk6-205ENSMUST00000224653 2976 ntBASIC13.46□□□□□ -0.26
Limk2O54785 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Limk2O54785 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Limk2O54785 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Limk2O54785 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Limk2O54785 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Limk2O54785 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Limk2O54785 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Limk2O54785 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Limk2O54785 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Limk2O54785 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Limk2O54785 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.45□□□□□ -0.26
Limk2O54785 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.45□□□□□ -0.26
Limk2O54785 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Limk2O54785 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Limk2O54785 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Limk2O54785 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Limk2O54785 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Limk2O54785 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.45□□□□□ -0.26
Limk2O54785 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Limk2O54785 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Limk2O54785 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.45□□□□□ -0.26
Limk2O54785 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Limk2O54785 Mir1247-201ENSMUST00000116706 82 ntBASIC13.45□□□□□ -0.26
Limk2O54785 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.45□□□□□ -0.26
Limk2O54785 Gm6447-201ENSMUST00000118905 835 ntBASIC13.45□□□□□ -0.26
Limk2O54785 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.45□□□□□ -0.26
Limk2O54785 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.45□□□□□ -0.26
Limk2O54785 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.45□□□□□ -0.26
Limk2O54785 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Limk2O54785 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.45□□□□□ -0.26
Limk2O54785 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.45□□□□□ -0.26
Limk2O54785 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Limk2O54785 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Limk2O54785 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.45□□□□□ -0.26
Limk2O54785 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.45□□□□□ -0.26
Limk2O54785 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.45□□□□□ -0.26
Limk2O54785 Gm38671-201ENSMUST00000200573 130 ntBASIC13.45□□□□□ -0.26
Limk2O54785 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.45□□□□□ -0.26
Limk2O54785 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.45□□□□□ -0.26
Limk2O54785 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.45□□□□□ -0.26
Limk2O54785 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.45□□□□□ -0.26
Limk2O54785 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.45□□□□□ -0.26
Limk2O54785 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Limk2O54785 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Limk2O54785 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Limk2O54785 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Limk2O54785 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.45□□□□□ -0.26
Limk2O54785 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Limk2O54785 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Limk2O54785 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Limk2O54785 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Limk2O54785 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Limk2O54785 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Limk2O54785 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Limk2O54785 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.45□□□□□ -0.26
Limk2O54785 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Limk2O54785 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Limk2O54785 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Limk2O54785 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Limk2O54785 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.45□□□□□ -0.26
Limk2O54785 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Limk2O54785 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.44□□□□□ -0.26
Limk2O54785 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
Limk2O54785 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Limk2O54785 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Limk2O54785 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Limk2O54785 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Limk2O54785 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.44□□□□□ -0.26
Limk2O54785 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Limk2O54785 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Limk2O54785 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.44□□□□□ -0.26
Limk2O54785 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Limk2O54785 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Limk2O54785 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Limk2O54785 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Limk2O54785 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.44□□□□□ -0.26
Limk2O54785 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Limk2O54785 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Limk2O54785 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Limk2O54785 Gm6152-201ENSMUST00000151704 340 ntBASIC13.44□□□□□ -0.26
Limk2O54785 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Limk2O54785 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Limk2O54785 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.44□□□□□ -0.26
Limk2O54785 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.44□□□□□ -0.26
Limk2O54785 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms