Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Npc1O35604 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.95□□□□□ -0.34
Npc1O35604 Gm26315-201ENSMUST00000083890 321 ntBASIC12.95□□□□□ -0.34
Npc1O35604 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Npc1O35604 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Npc1O35604 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Npc1O35604 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Npc1O35604 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Npc1O35604 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Npc1O35604 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Npc1O35604 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Npc1O35604 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.95□□□□□ -0.34
Npc1O35604 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Npc1O35604 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Npc1O35604 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.95□□□□□ -0.34
Npc1O35604 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Npc1O35604 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Npc1O35604 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Npc1O35604 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
Npc1O35604 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npc1O35604 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npc1O35604 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.94□□□□□ -0.34
Npc1O35604 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.94□□□□□ -0.34
Npc1O35604 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npc1O35604 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Npc1O35604 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npc1O35604 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npc1O35604 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npc1O35604 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npc1O35604 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npc1O35604 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Npc1O35604 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npc1O35604 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npc1O35604 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Npc1O35604 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.94□□□□□ -0.34
Npc1O35604 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npc1O35604 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Npc1O35604 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.94□□□□□ -0.34
Npc1O35604 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npc1O35604 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Npc1O35604 Gm14127-201ENSMUST00000117906 678 ntBASIC12.94□□□□□ -0.34
Npc1O35604 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.94□□□□□ -0.34
Npc1O35604 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.94□□□□□ -0.34
Npc1O35604 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Npc1O35604 Gm6266-201ENSMUST00000203844 806 ntBASIC12.94□□□□□ -0.34
Npc1O35604 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Npc1O35604 Gm18062-201ENSMUST00000208020 547 ntBASIC12.94□□□□□ -0.34
Npc1O35604 Gm18055-201ENSMUST00000208254 547 ntBASIC12.94□□□□□ -0.34
Npc1O35604 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.94□□□□□ -0.34
Npc1O35604 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Npc1O35604 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Npc1O35604 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Npc1O35604 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Npc1O35604 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npc1O35604 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npc1O35604 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npc1O35604 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npc1O35604 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.94□□□□□ -0.34
Npc1O35604 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Npc1O35604 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Npc1O35604 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npc1O35604 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npc1O35604 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.94□□□□□ -0.34
Npc1O35604 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npc1O35604 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Npc1O35604 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Npc1O35604 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.93□□□□□ -0.34
Npc1O35604 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.93□□□□□ -0.34
Npc1O35604 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Npc1O35604 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Npc1O35604 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Npc1O35604 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Npc1O35604 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.93□□□□□ -0.34
Npc1O35604 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.93□□□□□ -0.34
Npc1O35604 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Npc1O35604 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Npc1O35604 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Npc1O35604 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Npc1O35604 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.93□□□□□ -0.34
Npc1O35604 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Npc1O35604 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.93□□□□□ -0.34
Npc1O35604 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Npc1O35604 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Npc1O35604 Gm8213-201ENSMUST00000118191 441 ntBASIC12.93□□□□□ -0.34
Npc1O35604 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.93□□□□□ -0.34
Npc1O35604 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.93□□□□□ -0.34
Npc1O35604 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Npc1O35604 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Npc1O35604 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Npc1O35604 Gm27839-201ENSMUST00000184242 106 ntBASIC12.93□□□□□ -0.34
Npc1O35604 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Npc1O35604 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Npc1O35604 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Npc1O35604 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.93□□□□□ -0.34
Npc1O35604 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Npc1O35604 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.93□□□□□ -0.34
Npc1O35604 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.93□□□□□ -0.34
Npc1O35604 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Npc1O35604 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Npc1O35604 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms