Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cpsf2O35218 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Cpsf2O35218 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cpsf2O35218 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cpsf2O35218 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.2□□□□□ -0.14
Cpsf2O35218 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cpsf2O35218 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.2□□□□□ -0.14
Cpsf2O35218 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Cpsf2O35218 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cpsf2O35218 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Cpsf2O35218 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.2□□□□□ -0.14
Cpsf2O35218 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 Gm9522-201ENSMUST00000182394 926 ntBASIC14.2□□□□□ -0.14
Cpsf2O35218 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.2□□□□□ -0.14
Cpsf2O35218 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cpsf2O35218 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Cpsf2O35218 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.2□□□□□ -0.14
Cpsf2O35218 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf2O35218 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf2O35218 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf2O35218 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.19□□□□□ -0.14
Cpsf2O35218 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf2O35218 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf2O35218 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf2O35218 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf2O35218 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf2O35218 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf2O35218 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf2O35218 Syt7-205ENSMUST00000224135 1557 ntBASIC14.19□□□□□ -0.14
Cpsf2O35218 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cpsf2O35218 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.19□□□□□ -0.14
Cpsf2O35218 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf2O35218 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cpsf2O35218 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf2O35218 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.19□□□□□ -0.14
Cpsf2O35218 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.19□□□□□ -0.14
Cpsf2O35218 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf2O35218 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.19□□□□□ -0.14
Cpsf2O35218 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf2O35218 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf2O35218 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf2O35218 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.19□□□□□ -0.14
Cpsf2O35218 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf2O35218 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf2O35218 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf2O35218 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf2O35218 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf2O35218 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf2O35218 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Cpsf2O35218 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf2O35218 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf2O35218 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cpsf2O35218 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Cpsf2O35218 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf2O35218 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf2O35218 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf2O35218 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.18□□□□□ -0.14
Cpsf2O35218 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.18□□□□□ -0.14
Cpsf2O35218 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf2O35218 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf2O35218 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf2O35218 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.18□□□□□ -0.14
Cpsf2O35218 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.18□□□□□ -0.14
Cpsf2O35218 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cpsf2O35218 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf2O35218 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.18□□□□□ -0.14
Cpsf2O35218 Gm27772-201ENSMUST00000184900 187 ntBASIC14.18□□□□□ -0.14
Cpsf2O35218 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cpsf2O35218 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.18□□□□□ -0.14
Cpsf2O35218 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf2O35218 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf2O35218 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf2O35218 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf2O35218 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms