Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Alx4O35137 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.84□□□□□ -0.51
Alx4O35137 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.84□□□□□ -0.51
Alx4O35137 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.83□□□□□ -0.51
Alx4O35137 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Alx4O35137 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Alx4O35137 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Alx4O35137 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Alx4O35137 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Alx4O35137 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Alx4O35137 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Alx4O35137 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Alx4O35137 Pck2-205ENSMUST00000226352 2784 ntBASIC11.83□□□□□ -0.52
Alx4O35137 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Alx4O35137 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Alx4O35137 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Alx4O35137 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Alx4O35137 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Alx4O35137 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Alx4O35137 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.83□□□□□ -0.52
Alx4O35137 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.83□□□□□ -0.52
Alx4O35137 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Alx4O35137 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Alx4O35137 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Alx4O35137 Gm43703-201ENSMUST00000200523 763 ntBASIC11.83□□□□□ -0.52
Alx4O35137 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.83□□□□□ -0.52
Alx4O35137 Gm5312-201ENSMUST00000203728 547 ntBASIC11.83□□□□□ -0.52
Alx4O35137 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Alx4O35137 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Alx4O35137 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Alx4O35137 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Alx4O35137 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Alx4O35137 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.83□□□□□ -0.52
Alx4O35137 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.83□□□□□ -0.52
Alx4O35137 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.83□□□□□ -0.52
Alx4O35137 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.83□□□□□ -0.52
Alx4O35137 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Alx4O35137 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.83□□□□□ -0.52
Alx4O35137 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Alx4O35137 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.83□□□□□ -0.52
Alx4O35137 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Alx4O35137 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Alx4O35137 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.82□□□□□ -0.52
Alx4O35137 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Alx4O35137 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Alx4O35137 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Alx4O35137 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.82□□□□□ -0.52
Alx4O35137 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.82□□□□□ -0.52
Alx4O35137 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.82□□□□□ -0.52
Alx4O35137 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Alx4O35137 Gm5648-201ENSMUST00000122244 1587 ntBASIC11.82□□□□□ -0.52
Alx4O35137 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Alx4O35137 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.82□□□□□ -0.52
Alx4O35137 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Alx4O35137 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.82□□□□□ -0.52
Alx4O35137 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Alx4O35137 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.82□□□□□ -0.52
Alx4O35137 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms