Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Polr1aO35134 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC19.98■□□□□ 0.79
Polr1aO35134 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Polr1aO35134 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Polr1aO35134 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Polr1aO35134 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Polr1aO35134 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Polr1aO35134 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Polr1aO35134 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Polr1aO35134 Gm13813-201ENSMUST00000120998 787 ntBASIC19.98■□□□□ 0.79
Polr1aO35134 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Polr1aO35134 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Polr1aO35134 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Polr1aO35134 Gm7003-201ENSMUST00000195089 312 ntBASIC19.98■□□□□ 0.79
Polr1aO35134 CT009718.3-201ENSMUST00000221116 367 ntBASIC19.98■□□□□ 0.79
Polr1aO35134 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Polr1aO35134 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Polr1aO35134 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Polr1aO35134 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC19.98■□□□□ 0.79
Polr1aO35134 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Polr1aO35134 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Polr1aO35134 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Polr1aO35134 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Polr1aO35134 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Polr1aO35134 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Polr1aO35134 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Polr1aO35134 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC19.97■□□□□ 0.79
Polr1aO35134 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Polr1aO35134 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Polr1aO35134 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Polr1aO35134 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Polr1aO35134 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Polr1aO35134 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Polr1aO35134 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Polr1aO35134 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC19.97■□□□□ 0.79
Polr1aO35134 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC19.97■□□□□ 0.79
Polr1aO35134 Gm12266-201ENSMUST00000120311 962 ntBASIC19.97■□□□□ 0.79
Polr1aO35134 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Polr1aO35134 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Polr1aO35134 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC19.97■□□□□ 0.79
Polr1aO35134 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Polr1aO35134 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC19.97■□□□□ 0.79
Polr1aO35134 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Polr1aO35134 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Polr1aO35134 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Polr1aO35134 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Polr1aO35134 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Polr1aO35134 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Polr1aO35134 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Polr1aO35134 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Polr1aO35134 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Polr1aO35134 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Polr1aO35134 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC19.96■□□□□ 0.79
Polr1aO35134 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC19.96■□□□□ 0.79
Polr1aO35134 Mir1943-201ENSMUST00000158276 73 ntBASIC19.96■□□□□ 0.79
Polr1aO35134 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Polr1aO35134 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC19.96■□□□□ 0.79
Polr1aO35134 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Polr1aO35134 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Polr1aO35134 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Polr1aO35134 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Polr1aO35134 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Polr1aO35134 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Polr1aO35134 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Polr1aO35134 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Polr1aO35134 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Polr1aO35134 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Polr1aO35134 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
Polr1aO35134 Gm5070-201ENSMUST00000177599 862 ntBASIC19.96■□□□□ 0.79
Polr1aO35134 Gm7848-201ENSMUST00000210739 718 ntBASIC19.96■□□□□ 0.79
Polr1aO35134 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Polr1aO35134 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Polr1aO35134 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Polr1aO35134 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.79
Polr1aO35134 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Polr1aO35134 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Polr1aO35134 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Polr1aO35134 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Polr1aO35134 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Polr1aO35134 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Polr1aO35134 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Polr1aO35134 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Polr1aO35134 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Polr1aO35134 Gm9555-201ENSMUST00000200908 583 ntBASIC19.95■□□□□ 0.78
Polr1aO35134 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Polr1aO35134 Aprt-ps-201ENSMUST00000212311 505 ntBASIC19.95■□□□□ 0.78
Polr1aO35134 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC19.95■□□□□ 0.78
Polr1aO35134 AC159205.5-202ENSMUST00000224849 386 ntBASIC19.95■□□□□ 0.78
Polr1aO35134 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Polr1aO35134 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Polr1aO35134 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Polr1aO35134 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Polr1aO35134 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Polr1aO35134 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
Polr1aO35134 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Polr1aO35134 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Polr1aO35134 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Polr1aO35134 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Polr1aO35134 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Polr1aO35134 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms