Protein–RNA interactions for Protein: O09113

Otp, Homeobox protein orthopedia, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtpO09113 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
OtpO09113 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
OtpO09113 Mir7023-201ENSMUST00000185093 64 ntBASIC11.82□□□□□ -0.52
OtpO09113 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.82□□□□□ -0.52
OtpO09113 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.82□□□□□ -0.52
OtpO09113 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.82□□□□□ -0.52
OtpO09113 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
OtpO09113 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.82□□□□□ -0.52
OtpO09113 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
OtpO09113 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
OtpO09113 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
OtpO09113 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
OtpO09113 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
OtpO09113 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
OtpO09113 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
OtpO09113 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
OtpO09113 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
OtpO09113 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
OtpO09113 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
OtpO09113 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
OtpO09113 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
OtpO09113 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
OtpO09113 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
OtpO09113 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
OtpO09113 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.82□□□□□ -0.52
OtpO09113 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
OtpO09113 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
OtpO09113 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
OtpO09113 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.81□□□□□ -0.52
OtpO09113 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
OtpO09113 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
OtpO09113 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 Gm24694-201ENSMUST00000180054 110 ntBASIC11.81□□□□□ -0.52
OtpO09113 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
OtpO09113 Gm27663-201ENSMUST00000184839 110 ntBASIC11.81□□□□□ -0.52
OtpO09113 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.81□□□□□ -0.52
OtpO09113 Gm5279-201ENSMUST00000199575 745 ntBASIC11.81□□□□□ -0.52
OtpO09113 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
OtpO09113 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
OtpO09113 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
OtpO09113 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
OtpO09113 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.81□□□□□ -0.52
OtpO09113 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.81□□□□□ -0.52
OtpO09113 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
OtpO09113 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
OtpO09113 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
OtpO09113 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
OtpO09113 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
OtpO09113 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
OtpO09113 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
OtpO09113 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
OtpO09113 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
OtpO09113 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
OtpO09113 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
OtpO09113 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
OtpO09113 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.8□□□□□ -0.52
OtpO09113 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
OtpO09113 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
OtpO09113 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.8□□□□□ -0.52
OtpO09113 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.8□□□□□ -0.52
OtpO09113 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
OtpO09113 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
OtpO09113 Gm22189-201ENSMUST00000103822 86 ntBASIC11.8□□□□□ -0.52
OtpO09113 Gm15920-201ENSMUST00000118998 402 ntBASIC11.8□□□□□ -0.52
OtpO09113 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
OtpO09113 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.8□□□□□ -0.52
OtpO09113 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.8□□□□□ -0.52
OtpO09113 Gm27772-201ENSMUST00000184900 187 ntBASIC11.8□□□□□ -0.52
OtpO09113 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
OtpO09113 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.8□□□□□ -0.52
OtpO09113 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
OtpO09113 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
OtpO09113 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
OtpO09113 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
OtpO09113 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms