Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hdac1O09106 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hdac1O09106 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.78■□□□□ 0.12
Hdac1O09106 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Hdac1O09106 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hdac1O09106 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.77■□□□□ 0.12
Hdac1O09106 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hdac1O09106 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hdac1O09106 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hdac1O09106 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hdac1O09106 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hdac1O09106 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
Hdac1O09106 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hdac1O09106 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hdac1O09106 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC15.77■□□□□ 0.12
Hdac1O09106 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hdac1O09106 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Hdac1O09106 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hdac1O09106 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Hdac1O09106 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Hdac1O09106 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hdac1O09106 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hdac1O09106 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Hdac1O09106 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hdac1O09106 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
Hdac1O09106 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Hdac1O09106 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.77■□□□□ 0.11
Hdac1O09106 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hdac1O09106 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hdac1O09106 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hdac1O09106 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hdac1O09106 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hdac1O09106 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Hdac1O09106 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.76■□□□□ 0.11
Hdac1O09106 Gm21854-201ENSMUST00000179901 471 ntBASIC15.76■□□□□ 0.11
Hdac1O09106 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Hdac1O09106 Gm19078-201ENSMUST00000206311 727 ntBASIC15.76■□□□□ 0.11
Hdac1O09106 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.76■□□□□ 0.11
Hdac1O09106 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hdac1O09106 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hdac1O09106 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Hdac1O09106 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hdac1O09106 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hdac1O09106 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hdac1O09106 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.76■□□□□ 0.11
Hdac1O09106 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hdac1O09106 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Hdac1O09106 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hdac1O09106 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hdac1O09106 Gm37269-201ENSMUST00000193906 1891 ntBASIC15.76■□□□□ 0.11
Hdac1O09106 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hdac1O09106 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hdac1O09106 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac1O09106 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Hdac1O09106 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac1O09106 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Hdac1O09106 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac1O09106 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac1O09106 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac1O09106 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac1O09106 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.75■□□□□ 0.11
Hdac1O09106 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Hdac1O09106 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.75■□□□□ 0.11
Hdac1O09106 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Hdac1O09106 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac1O09106 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac1O09106 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.75■□□□□ 0.11
Hdac1O09106 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac1O09106 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac1O09106 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac1O09106 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac1O09106 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC15.75■□□□□ 0.11
Hdac1O09106 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac1O09106 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac1O09106 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac1O09106 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac1O09106 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac1O09106 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac1O09106 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac1O09106 Adra1a-206ENSMUST00000225182 2337 ntBASIC15.74■□□□□ 0.11
Hdac1O09106 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac1O09106 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac1O09106 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac1O09106 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac1O09106 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Hdac1O09106 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac1O09106 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac1O09106 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac1O09106 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac1O09106 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac1O09106 Gm23935-201ENSMUST00000102303 57 ntBASIC15.74■□□□□ 0.11
Hdac1O09106 Gm24270-201ENSMUST00000102326 57 ntBASIC15.74■□□□□ 0.11
Hdac1O09106 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.74■□□□□ 0.11
Hdac1O09106 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Hdac1O09106 Gm24245-201ENSMUST00000157318 57 ntBASIC15.74■□□□□ 0.11
Hdac1O09106 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac1O09106 Gm9522-201ENSMUST00000182394 926 ntBASIC15.74■□□□□ 0.11
Hdac1O09106 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.74■□□□□ 0.11
Hdac1O09106 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.74■□□□□ 0.11
Hdac1O09106 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms