Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trove2O08848 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trove2O08848 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trove2O08848 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trove2O08848 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.64□□□□□ -0.23
Trove2O08848 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trove2O08848 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trove2O08848 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trove2O08848 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trove2O08848 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trove2O08848 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trove2O08848 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trove2O08848 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trove2O08848 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.63□□□□□ -0.23
Trove2O08848 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trove2O08848 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.63□□□□□ -0.23
Trove2O08848 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.63□□□□□ -0.23
Trove2O08848 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Trove2O08848 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.63□□□□□ -0.23
Trove2O08848 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.63□□□□□ -0.23
Trove2O08848 Gm27622-201ENSMUST00000183779 60 ntBASIC13.63□□□□□ -0.23
Trove2O08848 Gm28630-201ENSMUST00000187806 498 ntBASIC13.63□□□□□ -0.23
Trove2O08848 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.63□□□□□ -0.23
Trove2O08848 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.63□□□□□ -0.23
Trove2O08848 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.63□□□□□ -0.23
Trove2O08848 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trove2O08848 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trove2O08848 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trove2O08848 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trove2O08848 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trove2O08848 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trove2O08848 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trove2O08848 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trove2O08848 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trove2O08848 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trove2O08848 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trove2O08848 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Trove2O08848 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trove2O08848 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trove2O08848 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trove2O08848 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trove2O08848 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trove2O08848 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trove2O08848 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trove2O08848 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trove2O08848 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Trove2O08848 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trove2O08848 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trove2O08848 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trove2O08848 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trove2O08848 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trove2O08848 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trove2O08848 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trove2O08848 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trove2O08848 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trove2O08848 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.62□□□□□ -0.23
Trove2O08848 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trove2O08848 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trove2O08848 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Trove2O08848 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trove2O08848 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trove2O08848 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.62□□□□□ -0.23
Trove2O08848 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Trove2O08848 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trove2O08848 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trove2O08848 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trove2O08848 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trove2O08848 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trove2O08848 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trove2O08848 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trove2O08848 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trove2O08848 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trove2O08848 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trove2O08848 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trove2O08848 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Trove2O08848 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Trove2O08848 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trove2O08848 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trove2O08848 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trove2O08848 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trove2O08848 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.62□□□□□ -0.23
Trove2O08848 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.62□□□□□ -0.23
Trove2O08848 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trove2O08848 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trove2O08848 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trove2O08848 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trove2O08848 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trove2O08848 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trove2O08848 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trove2O08848 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trove2O08848 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trove2O08848 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.61□□□□□ -0.23
Trove2O08848 Gm22175-201ENSMUST00000175007 78 ntBASIC13.61□□□□□ -0.23
Trove2O08848 Gm25144-201ENSMUST00000179561 110 ntBASIC13.61□□□□□ -0.23
Trove2O08848 Gm25352-201ENSMUST00000179815 110 ntBASIC13.61□□□□□ -0.23
Trove2O08848 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trove2O08848 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trove2O08848 Gm18027-201ENSMUST00000218947 619 ntBASIC13.61□□□□□ -0.23
Trove2O08848 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.61□□□□□ -0.23
Trove2O08848 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms