Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1aO08602 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1aO08602 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.77□□□□□ -0.53
Raet1aO08602 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1aO08602 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.77□□□□□ -0.53
Raet1aO08602 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1aO08602 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1aO08602 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1aO08602 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.77□□□□□ -0.53
Raet1aO08602 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1aO08602 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Raet1aO08602 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.77□□□□□ -0.53
Raet1aO08602 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1aO08602 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1aO08602 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1aO08602 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Raet1aO08602 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1aO08602 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.76□□□□□ -0.53
Raet1aO08602 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Raet1aO08602 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Raet1aO08602 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Raet1aO08602 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.76□□□□□ -0.53
Raet1aO08602 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Raet1aO08602 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.76□□□□□ -0.53
Raet1aO08602 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.76□□□□□ -0.53
Raet1aO08602 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.76□□□□□ -0.53
Raet1aO08602 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.76□□□□□ -0.53
Raet1aO08602 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.76□□□□□ -0.53
Raet1aO08602 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.76□□□□□ -0.53
Raet1aO08602 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.76□□□□□ -0.53
Raet1aO08602 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.76□□□□□ -0.53
Raet1aO08602 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.76□□□□□ -0.53
Raet1aO08602 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Raet1aO08602 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.76□□□□□ -0.53
Raet1aO08602 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.76□□□□□ -0.53
Raet1aO08602 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Raet1aO08602 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.76□□□□□ -0.53
Raet1aO08602 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.76□□□□□ -0.53
Raet1aO08602 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.76□□□□□ -0.53
Raet1aO08602 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Raet1aO08602 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1aO08602 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Raet1aO08602 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Raet1aO08602 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Raet1aO08602 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Raet1aO08602 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Raet1aO08602 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Raet1aO08602 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Raet1aO08602 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Raet1aO08602 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Raet1aO08602 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Raet1aO08602 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Raet1aO08602 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Raet1aO08602 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Raet1aO08602 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Raet1aO08602 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.75□□□□□ -0.53
Raet1aO08602 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.75□□□□□ -0.53
Raet1aO08602 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Raet1aO08602 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Raet1aO08602 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.75□□□□□ -0.53
Raet1aO08602 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.75□□□□□ -0.53
Raet1aO08602 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Raet1aO08602 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.75□□□□□ -0.53
Raet1aO08602 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Raet1aO08602 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.75□□□□□ -0.53
Raet1aO08602 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.75□□□□□ -0.53
Raet1aO08602 Gm6983-201ENSMUST00000214912 628 ntBASIC11.75□□□□□ -0.53
Raet1aO08602 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.75□□□□□ -0.53
Raet1aO08602 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.75□□□□□ -0.53
Raet1aO08602 Gm15823-201ENSMUST00000064305 670 ntBASIC11.75□□□□□ -0.53
Raet1aO08602 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Raet1aO08602 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms