Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp35M0QWN7 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp35M0QWN7 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp35M0QWN7 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp35M0QWN7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp35M0QWN7 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp35M0QWN7 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp35M0QWN7 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.26□□□□□ -0.13
Usp35M0QWN7 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Usp35M0QWN7 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Gm38671-201ENSMUST00000200573 130 ntBASIC14.26□□□□□ -0.13
Usp35M0QWN7 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp35M0QWN7 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Usp35M0QWN7 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp35M0QWN7 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp35M0QWN7 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.25□□□□□ -0.13
Usp35M0QWN7 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp35M0QWN7 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp35M0QWN7 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp35M0QWN7 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp35M0QWN7 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Usp35M0QWN7 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp35M0QWN7 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Usp35M0QWN7 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp35M0QWN7 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp35M0QWN7 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp35M0QWN7 Gm12957-201ENSMUST00000117835 377 ntBASIC14.25□□□□□ -0.13
Usp35M0QWN7 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.25□□□□□ -0.13
Usp35M0QWN7 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.25□□□□□ -0.13
Usp35M0QWN7 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp35M0QWN7 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp35M0QWN7 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp35M0QWN7 Gm6091-201ENSMUST00000098307 165 ntBASIC14.25□□□□□ -0.13
Usp35M0QWN7 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp35M0QWN7 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp35M0QWN7 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp35M0QWN7 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Usp35M0QWN7 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Usp35M0QWN7 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp35M0QWN7 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp35M0QWN7 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp35M0QWN7 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Gm13612-201ENSMUST00000119276 390 ntBASIC14.24□□□□□ -0.13
Usp35M0QWN7 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.24□□□□□ -0.13
Usp35M0QWN7 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.24□□□□□ -0.13
Usp35M0QWN7 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Gm5161-201ENSMUST00000075243 853 ntBASIC14.24□□□□□ -0.13
Usp35M0QWN7 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms