Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Gm6912-201ENSMUST00000117218 544 ntBASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Mir1895-201ENSMUST00000122615 79 ntBASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Gm43474-201ENSMUST00000196415 774 ntBASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa8J3QNX5 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Gm5779-201ENSMUST00000218467 910 ntBASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms