Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc180J3QNE4 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc180J3QNE4 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc180J3QNE4 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc180J3QNE4 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Ccdc180J3QNE4 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Ccdc180J3QNE4 Gm44262-201ENSMUST00000204969 372 ntBASIC23.76■■□□□ 1.39
Ccdc180J3QNE4 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Ccdc180J3QNE4 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc180J3QNE4 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc180J3QNE4 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Ccdc180J3QNE4 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc180J3QNE4 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc180J3QNE4 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc180J3QNE4 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc180J3QNE4 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc180J3QNE4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc180J3QNE4 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc180J3QNE4 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC23.75■■□□□ 1.39
Ccdc180J3QNE4 Gm9678-201ENSMUST00000198979 1149 ntBASIC23.75■■□□□ 1.39
Ccdc180J3QNE4 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc180J3QNE4 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc180J3QNE4 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc180J3QNE4 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc180J3QNE4 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc180J3QNE4 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc180J3QNE4 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc180J3QNE4 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Ccdc180J3QNE4 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc180J3QNE4 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Ccdc180J3QNE4 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC23.74■■□□□ 1.39
Ccdc180J3QNE4 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc180J3QNE4 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Ccdc180J3QNE4 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC23.74■■□□□ 1.39
Ccdc180J3QNE4 AC125209.1-201ENSMUST00000225812 766 ntBASIC23.74■■□□□ 1.39
Ccdc180J3QNE4 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc180J3QNE4 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc180J3QNE4 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc180J3QNE4 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc180J3QNE4 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc180J3QNE4 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Ccdc180J3QNE4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc180J3QNE4 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc180J3QNE4 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc180J3QNE4 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Ccdc180J3QNE4 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC23.73■■□□□ 1.39
Ccdc180J3QNE4 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc180J3QNE4 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC23.73■■□□□ 1.39
Ccdc180J3QNE4 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc180J3QNE4 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC23.73■■□□□ 1.39
Ccdc180J3QNE4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Ccdc180J3QNE4 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc180J3QNE4 Gm9333-201ENSMUST00000205452 1323 ntBASIC23.73■■□□□ 1.39
Ccdc180J3QNE4 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc180J3QNE4 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc180J3QNE4 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc180J3QNE4 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc180J3QNE4 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc180J3QNE4 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc180J3QNE4 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC23.73■■□□□ 1.39
Ccdc180J3QNE4 Gm12058-201ENSMUST00000118614 437 ntBASIC23.73■■□□□ 1.39
Ccdc180J3QNE4 Gm14832-201ENSMUST00000121289 322 ntBASIC23.73■■□□□ 1.39
Ccdc180J3QNE4 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc180J3QNE4 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC23.73■■□□□ 1.39
Ccdc180J3QNE4 Gm14267-206ENSMUST00000226870 1209 ntBASIC23.73■■□□□ 1.39
Ccdc180J3QNE4 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc180J3QNE4 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc180J3QNE4 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc180J3QNE4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc180J3QNE4 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc180J3QNE4 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc180J3QNE4 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Ccdc180J3QNE4 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC23.72■■□□□ 1.39
Ccdc180J3QNE4 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc180J3QNE4 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc180J3QNE4 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc180J3QNE4 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC23.72■■□□□ 1.39
Ccdc180J3QNE4 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Ccdc180J3QNE4 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC23.72■■□□□ 1.39
Ccdc180J3QNE4 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Ccdc180J3QNE4 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc180J3QNE4 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc180J3QNE4 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc180J3QNE4 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc180J3QNE4 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Ccdc180J3QNE4 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc180J3QNE4 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Ccdc180J3QNE4 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC23.72■■□□□ 1.39
Ccdc180J3QNE4 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Gm43908-201ENSMUST00000205074 1472 ntBASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Gm9083-201ENSMUST00000120423 819 ntBASIC23.71■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms