Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Gm37153-201ENSMUST00000193637 231 ntBASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Gm37230-201ENSMUST00000194491 818 ntBASIC13.59□□□□□ -0.23
Trim55G3X8Y1 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim55G3X8Y1 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Trim55G3X8Y1 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim55G3X8Y1 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.58□□□□□ -0.23
Trim55G3X8Y1 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trim55G3X8Y1 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trim55G3X8Y1 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim55G3X8Y1 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim55G3X8Y1 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.58□□□□□ -0.23
Trim55G3X8Y1 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim55G3X8Y1 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim55G3X8Y1 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Gm12350-201ENSMUST00000121208 462 ntBASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.58□□□□□ -0.24
Trim55G3X8Y1 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim55G3X8Y1 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms