Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Gm25948-201ENSMUST00000175334 112 ntBASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Gm17330-201ENSMUST00000221047 165 ntBASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Gm25144-201ENSMUST00000179561 110 ntBASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Gm25352-201ENSMUST00000179815 110 ntBASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Gm43703-201ENSMUST00000200523 763 ntBASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh1F7BJK1 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh1F7BJK1 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh1F7BJK1 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh1F7BJK1 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdh1F7BJK1 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh1F7BJK1 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh1F7BJK1 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh1F7BJK1 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh1F7BJK1 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdh1F7BJK1 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.92□□□□□ -0.5
Pcdh1F7BJK1 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh1F7BJK1 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.92□□□□□ -0.5
Pcdh1F7BJK1 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Pcdh1F7BJK1 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh1F7BJK1 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh1F7BJK1 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh1F7BJK1 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh1F7BJK1 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh1F7BJK1 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh1F7BJK1 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh1F7BJK1 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.92□□□□□ -0.5
Pcdh1F7BJK1 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Pcdh1F7BJK1 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.92□□□□□ -0.5
Pcdh1F7BJK1 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.92□□□□□ -0.5
Pcdh1F7BJK1 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.92□□□□□ -0.5
Pcdh1F7BJK1 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms