Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Gm13736-201ENSMUST00000119272 253 ntBASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Gm14704-201ENSMUST00000120300 874 ntBASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Gm11354-201ENSMUST00000121974 422 ntBASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Gm2445-201ENSMUST00000182798 989 ntBASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Gm38092-201ENSMUST00000195600 653 ntBASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 AY036118-201ENSMUST00000200021 923 ntBASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Gm9111-201ENSMUST00000219394 709 ntBASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc188F6WEU2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Gm14832-201ENSMUST00000121289 322 ntBASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Gm25604-201ENSMUST00000158359 133 ntBASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Gm22877-201ENSMUST00000175451 105 ntBASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 AC171241.1-201ENSMUST00000228144 1166 ntBASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.25□□□□□ -0.29
Ccdc188F6WEU2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms