Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Gm21092-201ENSMUST00000178995 955 ntBASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Gm6390-201ENSMUST00000215034 589 ntBASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Gm18968-201ENSMUST00000221319 862 ntBASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Gm43969-201ENSMUST00000204833 535 ntBASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Gm19994-201ENSMUST00000217086 586 ntBASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Gm270-201ENSMUST00000223010 976 ntBASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Gm12453-201ENSMUST00000121981 331 ntBASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Gm8199-201ENSMUST00000121323 823 ntBASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 AC154759.1-201ENSMUST00000224137 1159 ntBASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Col6a3E9PWQ3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Gm26875-201ENSMUST00000181006 950 ntBASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Gm2875-201ENSMUST00000211333 360 ntBASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 AC187103.3-201ENSMUST00000225725 646 ntBASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Gm14704-201ENSMUST00000120300 874 ntBASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Col6a3E9PWQ3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms