Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Gm15487-201ENSMUST00000122373 465 ntBASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Gm20949-201ENSMUST00000206478 952 ntBASIC13.3□□□□□ -0.28
Gm28043E0CXC2 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm28043E0CXC2 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Gm14719-201ENSMUST00000121891 340 ntBASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Mir497b-201ENSMUST00000093601 125 ntBASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.29□□□□□ -0.28
Gm28043E0CXC2 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Mir698-201ENSMUST00000102164 109 ntBASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Gm6912-201ENSMUST00000117218 544 ntBASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms